BLASTX nr result

ID: Coptis24_contig00025018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025018
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC80386.1| hypothetical protein OsI_22511 [Oryza sativa Indi...    62   1e-07
gb|EEC79648.1| hypothetical protein OsI_20883 [Oryza sativa Indi...    62   1e-07
ref|XP_002441019.1| hypothetical protein SORBIDRAFT_09g018960 [S...    57   3e-06
emb|CAE02522.2| OSJNBb0003A12.9 [Oryza sativa Japonica Group]          56   5e-06
gb|EEE63122.1| hypothetical protein OsJ_17930 [Oryza sativa Japo...    56   5e-06

>gb|EEC80386.1| hypothetical protein OsI_22511 [Oryza sativa Indica Group]
          Length = 754

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
 Frame = -2

Query: 484 LWIQNFGLPLERSTWENIHKIGFAFGLVVPID*VGGSDARNSFSRVQVMYPIRRRM---I 314
           +WI+ + LPL   T       G  FG V  +D       R+ F R++V  P+ + +   I
Sbjct: 292 IWIRIYDLPLVLMTKARGELYGSKFGRVREVDVEADGRNRHDFFRIRVDLPVTKPLKSKI 351

Query: 313 STMVNLHGNKYI*IY-FKYEKLPVFCYCCGLIGHDYKEC 200
           +  +N+HG++ I  +  +YE++P FC+ CG IGH  K+C
Sbjct: 352 AIKINVHGSEEIKRFDVRYERIPYFCFFCGFIGHSDKDC 390


>gb|EEC79648.1| hypothetical protein OsI_20883 [Oryza sativa Indica Group]
          Length = 456

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
 Frame = -2

Query: 484 LWIQNFGLPLERSTWENIHKIGFAFGLVVPID*VGGSDARNSFSRVQVMYPIRRRM---I 314
           +WI+ + LPL   T       G  FG V  +D       R+ F R++V  P+ + +   I
Sbjct: 191 IWIRIYDLPLVLMTKARGELYGSKFGRVREVDVEADGRNRHDFFRIRVDLPVTKPLKSKI 250

Query: 313 STMVNLHGNKYI*IY-FKYEKLPVFCYCCGLIGHDYKEC 200
           +  +N+HG++ I  +  +YE++P FC+ CG IGH  K+C
Sbjct: 251 AIKINVHGSEEIKRFDVRYERIPYFCFFCGFIGHSDKDC 289


>ref|XP_002441019.1| hypothetical protein SORBIDRAFT_09g018960 [Sorghum bicolor]
           gi|241946304|gb|EES19449.1| hypothetical protein
           SORBIDRAFT_09g018960 [Sorghum bicolor]
          Length = 468

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
 Frame = -2

Query: 484 LWIQNFGLPLERSTWENIHKIGFAFGLVVPID*VGGSDARNSFSRVQVMYPIRRRMISTM 305
           +W++ + +P+  ST+  +H +G   G V+ +      D    F RV++ +P+   +  ++
Sbjct: 119 VWVRLYDIPVGMSTYSFVHALGSKLGRVLEV-----GDMVKDFKRVRIDFPLASPLKKSV 173

Query: 304 -VNLHGNKYI*IYFKYEKLPVFCYCCGLIGHDYKEC 200
            + + G   +    KYE +P FC+ CG IGH  +EC
Sbjct: 174 PIKVRGCGLLEFQAKYEGIPFFCFNCGRIGHAVREC 209


>emb|CAE02522.2| OSJNBb0003A12.9 [Oryza sativa Japonica Group]
          Length = 884

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 4/159 (2%)
 Frame = -2

Query: 484 LWIQNFGLPLERSTWENIHKIGFAFGLVVPID*VGGSDARNSFSRVQVMYPIRR---RMI 314
           +WI+ + LPL   T       G  FG V  +D       R+ F R++V  P+++     I
Sbjct: 220 IWIRIYDLPLVLMTKAIGELYGSKFGKVREVDVEEDGRNRHDFFRIRVELPVKKPPKSKI 279

Query: 313 STMVNLHGNKYI*IY-FKYEKLPVFCYCCGLIGHDYKECKAFIHHPLLGKEGRLKSKAAS 137
           +    +HG + +  +  +YE++P FC+ CG IGH  K+C+  I            S   +
Sbjct: 280 AIKTTVHGVEAVRRFDVRYERVPFFCFICGYIGHSVKDCEKKI------------SNMDA 327

Query: 136 VLSFSNRIRATSFKFGIGIQSRKVLKWDPKVENSGKSVP 20
              FS  +R +  K       RKV    P+   SG  +P
Sbjct: 328 PFQFSAELRCSPLK----AFERKVSGGSPR-HQSGDMIP 361


>gb|EEE63122.1| hypothetical protein OsJ_17930 [Oryza sativa Japonica Group]
          Length = 399

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
 Frame = -2

Query: 484 LWIQNFGLPLERSTWENIHKIGFAFGLVVPID*VGGSDARNSFSRVQVMYPIRRRMISTM 305
           +WI+ + LPL           G  FG V  +D       R+ F R++V  P+++ + S +
Sbjct: 148 IWIRIYDLPLALMIKARGQLYGSRFGHVRKVDVEEDGRNRHDFFRIRVDLPVKKPLKSKL 207

Query: 304 ---VNLHGNKYI*IY-FKYEKLPVFCYCCGLIGHDYKECK 197
              +N  G + +  +  +Y+ +P FC+CCG IGH  K+C+
Sbjct: 208 AIKINAQGTEVVIRFDVRYKWIPYFCFCCGFIGHSDKDCE 247


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