BLASTX nr result

ID: Coptis24_contig00025010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025010
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17992.3| unnamed protein product [Vitis vinifera]               49   2e-09
emb|CAN65701.1| hypothetical protein VITISV_039251 [Vitis vinifera]    49   9e-09
ref|XP_003541927.1| PREDICTED: G-type lectin S-receptor-like ser...    42   6e-07
emb|CBI17991.3| unnamed protein product [Vitis vinifera]               43   2e-06
ref|XP_002262617.2| PREDICTED: G-type lectin S-receptor-like ser...    43   4e-06

>emb|CBI17992.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score = 49.3 bits (116), Expect(2) = 2e-09
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = -1

Query: 154 ECGNPAYRNFECDDSTGYLTFNALDSSYAVNKIIPEMRTIVINSESSNFNS 2
           +CG+P Y  F CD+ TG ++F  +DSSY V+ I P+    VI  + +N +S
Sbjct: 217 KCGDPEYFRFNCDNDTGQVSFKVIDSSYRVSSIDPKALKFVIQVKDANCSS 267



 Score = 37.0 bits (84), Expect(2) = 2e-09
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = -2

Query: 231 SEIVTNRRLCQNCGIHAIPYPLSTGP 154
           S++ +  R C+ CG + IPYPLSTGP
Sbjct: 191 SDLESTTRNCETCGTNMIPYPLSTGP 216


>emb|CAN65701.1| hypothetical protein VITISV_039251 [Vitis vinifera]
          Length = 915

 Score = 49.3 bits (116), Expect(2) = 9e-09
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = -1

Query: 154 ECGNPAYRNFECDDSTGYLTFNALDSSYAVNKIIPEMRTIVINSESSNFNS 2
           +CG+P Y  F CD  TG ++F  +DSSY V+ I P+    VI  + +N +S
Sbjct: 422 KCGDPEYFRFNCDXDTGQVSFKVIDSSYRVSSIDPKAXKFVIQVKDANXSS 472



 Score = 35.0 bits (79), Expect(2) = 9e-09
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -2

Query: 231 SEIVTNRRLCQNCGIHAIPYPLSTGP 154
           S++    R C  CG + IPYPLSTGP
Sbjct: 396 SDLEXTTRNCXTCGTNMIPYPLSTGP 421


>ref|XP_003541927.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase At4g03230-like [Glycine max]
          Length = 999

 Score = 42.4 bits (98), Expect(2) = 6e-07
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = -2

Query: 240 IDASEIVTNRRLCQNCGIHAIPYPLSTGPN 151
           +  S+IV   + C+ CGI+ IPYPLSTGPN
Sbjct: 431 VKRSDIVPYAKSCEPCGIYVIPYPLSTGPN 460



 Score = 35.8 bits (81), Expect(2) = 6e-07
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 151 CGNPAYRNFECDDSTGYLTFNAL-DSSYAVNKIIPEMRTIVINSESS 14
           CG+P Y NF C+ STG +TF  L  +S+ V  I  + R   I    S
Sbjct: 461 CGDPMYNNFNCNKSTGQVTFKILGGTSHQVIWIDEDTRMFYIQPNGS 507


>emb|CBI17991.3| unnamed protein product [Vitis vinifera]
          Length = 1130

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 19/52 (36%), Positives = 31/52 (59%)
 Frame = -1

Query: 157 TECGNPAYRNFECDDSTGYLTFNALDSSYAVNKIIPEMRTIVINSESSNFNS 2
           ++CG+  Y NFEC+++TG + F     +Y V  I PE  T VI  + ++ +S
Sbjct: 237 SKCGDSTYFNFECNNTTGQVQFKVPGGAYRVTSINPETLTFVIQLKEADCSS 288



 Score = 33.1 bits (74), Expect(2) = 2e-06
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -2

Query: 231 SEIVTNRRLCQNCGIHAIPYPLSTG 157
           S+I    R C+ CG + IPYPLSTG
Sbjct: 212 SDIKPTVRNCETCGSNMIPYPLSTG 236


>ref|XP_002262617.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
            kinase At4g03230-like [Vitis vinifera]
          Length = 1585

 Score = 43.1 bits (100), Expect(2) = 4e-06
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = -1

Query: 157  TECGNPAYRNFECDDSTGYLTFNALDSSYAVNKIIPEMRTIVINSESSNFNS 2
            ++CG+P Y NFEC+ +TG + F     +Y V  I PE    VI  + ++ +S
Sbjct: 1028 SKCGDPMYFNFECNSTTGQVQFKVPGGAYRVTSINPETLRFVIQLKEADCSS 1079



 Score = 32.3 bits (72), Expect(2) = 4e-06
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 231  SEIVTNRRLCQNCGIHAIPYPLSTG 157
            S+I    R C+ CG   IPYPLSTG
Sbjct: 1003 SDIKPTVRNCETCGSSMIPYPLSTG 1027


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