BLASTX nr result

ID: Coptis24_contig00025004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025004
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK04842.1| predicted protein [Hordeum vulgare subsp. vulgare]     62   5e-08
dbj|BAK04511.1| predicted protein [Hordeum vulgare subsp. vulgare]     62   5e-08
ref|XP_003571640.1| PREDICTED: oligopeptide transporter 5-like [...    62   6e-08
ref|NP_001175518.1| Os08g0320200 [Oryza sativa Japonica Group] g...    59   4e-07
gb|EEE68464.1| hypothetical protein OsJ_26860 [Oryza sativa Japo...    59   4e-07

>dbj|BAK04842.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 736

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/83 (42%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
 Frame = +1

Query: 67  GQAKTFISDFKMGHDMKIQPRSMFLLQVAGTXXXXXXXXXXXXRCGDYSQRWRTYGKKIN 246
           GQA TF+SDFK+GH MKI PRSMF +Q+AGT                ++  W       N
Sbjct: 503 GQALTFVSDFKLGHYMKIPPRSMFFVQLAGTVTSSTV---------HFATAWWLLTTVKN 553

Query: 247 ------LPEGRPWTCPALHSYYS 297
                 LPEG PWTCP    +Y+
Sbjct: 554 VCDVDVLPEGSPWTCPGDDVFYN 576


>dbj|BAK04511.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 693

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/83 (42%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
 Frame = +1

Query: 67  GQAKTFISDFKMGHDMKIQPRSMFLLQVAGTXXXXXXXXXXXXRCGDYSQRWRTYGKKIN 246
           GQA TF+SDFK+GH MKI PRSMF +Q+AGT                ++  W       N
Sbjct: 460 GQALTFVSDFKLGHYMKIPPRSMFFVQLAGTVTSSTV---------HFATAWWLLTTVKN 510

Query: 247 ------LPEGRPWTCPALHSYYS 297
                 LPEG PWTCP    +Y+
Sbjct: 511 VCDVDVLPEGSPWTCPGDDVFYN 533


>ref|XP_003571640.1| PREDICTED: oligopeptide transporter 5-like [Brachypodium
           distachyon]
          Length = 734

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/83 (43%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
 Frame = +1

Query: 67  GQAKTFISDFKMGHDMKIQPRSMFLLQVAGTXXXXXXXXXXXXRCGDYSQRW---RTYGK 237
           GQA TF+SDFK+GH MKI PRSMF  Q+AGT                ++  W    T   
Sbjct: 501 GQALTFVSDFKLGHYMKIPPRSMFFAQLAGTVTASTV---------HFATAWWLLTTVNN 551

Query: 238 KIN---LPEGRPWTCPALHSYYS 297
             N   LPEG PWTCP    +Y+
Sbjct: 552 ICNVESLPEGSPWTCPGDDVFYN 574


>ref|NP_001175518.1| Os08g0320200 [Oryza sativa Japonica Group]
           gi|42409160|dbj|BAD10427.1| putative sexual
           differentiation process protein isp4 [Oryza sativa
           Japonica Group] gi|50508148|dbj|BAD30723.1| putative
           sexual differentiation process protein isp4 [Oryza
           sativa Japonica Group] gi|215768171|dbj|BAH00400.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|218200932|gb|EEC83359.1| hypothetical protein
           OsI_28765 [Oryza sativa Indica Group]
           gi|255678354|dbj|BAH94246.1| Os08g0320200 [Oryza sativa
           Japonica Group] gi|258644641|dbj|BAI39890.1| sexual
           differentiation process protein isp4-like [Oryza sativa
           Indica Group]
          Length = 733

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
 Frame = +1

Query: 70  QAKTFISDFKMGHDMKIQPRSMFLLQVAGTXXXXXXXXXXXXRCGDYSQRW------RTY 231
           QA TF+SDFK+GH MKI PRSMF++Q+AGT                ++  W      R  
Sbjct: 500 QALTFVSDFKLGHYMKIPPRSMFMVQLAGTVVASTV---------HFATAWWLLTTVRNI 550

Query: 232 GKKINLPEGRPWTCPALHSYYS 297
               +LP G PWTCP    +Y+
Sbjct: 551 CDVDSLPLGSPWTCPGEDVFYN 572


>gb|EEE68464.1| hypothetical protein OsJ_26860 [Oryza sativa Japonica Group]
          Length = 733

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
 Frame = +1

Query: 70  QAKTFISDFKMGHDMKIQPRSMFLLQVAGTXXXXXXXXXXXXRCGDYSQRW------RTY 231
           QA TF+SDFK+GH MKI PRSMF++Q+AGT                ++  W      R  
Sbjct: 500 QALTFVSDFKLGHYMKIPPRSMFMVQLAGTVVASTV---------HFATAWWLLTTVRNI 550

Query: 232 GKKINLPEGRPWTCPALHSYYS 297
               +LP G PWTCP    +Y+
Sbjct: 551 CDVDSLPLGSPWTCPGEDVFYN 572


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