BLASTX nr result

ID: Coptis24_contig00025000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025000
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318264.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
ref|XP_002322431.1| predicted protein [Populus trichocarpa] gi|2...   393   e-107
ref|XP_002510887.1| alpha-l-fucosidase, putative [Ricinus commun...   390   e-106
ref|XP_002270630.2| PREDICTED: alpha-L-fucosidase 1-like [Vitis ...   382   e-104
ref|XP_004164690.1| PREDICTED: alpha-L-fucosidase 1-like [Cucumi...   379   e-103

>ref|XP_002318264.1| predicted protein [Populus trichocarpa] gi|222858937|gb|EEE96484.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  400 bits (1028), Expect = e-109
 Identities = 183/246 (74%), Positives = 211/246 (85%), Gaps = 1/246 (0%)
 Frame = -2

Query: 735 VDVGLYLSPWDRHEKRYGHEIEYNEYYLGQLQELLNRYGSVQEIWFDGAKGSNAPNMSYY 556
           +DVGLYLSPWDRH+KRYGH+++YNEYYL QLQELLN+YG V+EIWFDGAKGSN PNMSYY
Sbjct: 145 IDVGLYLSPWDRHDKRYGHDLQYNEYYLAQLQELLNKYGIVREIWFDGAKGSNVPNMSYY 204

Query: 555 FNDWFSMVKELQGSINIFSDAGLDVRWVGNEKGYAGRTCWSTINRTLITIG-GNMEDYLN 379
           F+DWFSMVKELQ SINIFSDAG DVRWVGNE G+AG TCWSTINRT ++IG G++ DYLN
Sbjct: 205 FSDWFSMVKELQTSINIFSDAGPDVRWVGNEMGFAGSTCWSTINRTSLSIGNGSIVDYLN 264

Query: 378 KGDPRGTDWLPAECDVSIRTGWFWHKNQTAKPLSHLLNIFYKSVGRNCVLLLNVPPNTMG 199
            GD +GTDWLPAECDVSIR GWFWHK+++ K LS LL+I+YKSVGRNCVLL NVPPNT G
Sbjct: 265 TGDSKGTDWLPAECDVSIRKGWFWHKSESPKRLSELLDIYYKSVGRNCVLLFNVPPNTTG 324

Query: 198 LLSANDVLRLREFREAIDTIFTVNYAEGSNIKASSQRGTNSDEFGTEKVVDDDHLWSYWA 19
           L+S NDV RL+EFR AIDTIF+ N AE   ++ASSQRG    +FG E V+D DHLW+YWA
Sbjct: 325 LISENDVQRLKEFRGAIDTIFSTNLAESCFVRASSQRGGKDGDFGPENVLDGDHLWTYWA 384

Query: 18  PGDESN 1
           P DE +
Sbjct: 385 PKDEES 390


>ref|XP_002322431.1| predicted protein [Populus trichocarpa] gi|222869427|gb|EEF06558.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  393 bits (1009), Expect = e-107
 Identities = 179/244 (73%), Positives = 209/244 (85%), Gaps = 1/244 (0%)
 Frame = -2

Query: 735 VDVGLYLSPWDRHEKRYGHEIEYNEYYLGQLQELLNRYGSVQEIWFDGAKGSNAPNMSYY 556
           +DVGLYLSPWDRH+KRYG+++EYN YY+ QLQELLN+YGS++EIWFDGAKGSNAPNMSYY
Sbjct: 146 IDVGLYLSPWDRHDKRYGNDLEYNGYYMAQLQELLNKYGSIREIWFDGAKGSNAPNMSYY 205

Query: 555 FNDWFSMVKELQGSINIFSDAGLDVRWVGNEKGYAGRTCWSTINRTLITIG-GNMEDYLN 379
           F+DWFSMVKELQ SINIFSDAG DVRWVGNE G+AG +CWSTINRT ++IG G++ DYLN
Sbjct: 206 FSDWFSMVKELQASINIFSDAGPDVRWVGNENGFAGDSCWSTINRTSLSIGNGSIVDYLN 265

Query: 378 KGDPRGTDWLPAECDVSIRTGWFWHKNQTAKPLSHLLNIFYKSVGRNCVLLLNVPPNTMG 199
            GDP GTDWLPAECDVSIR GWFWHK+++ K LS LL+I+YKSVGRNCVLL NVPPN+ G
Sbjct: 266 TGDPEGTDWLPAECDVSIRRGWFWHKSESPKKLSMLLDIYYKSVGRNCVLLFNVPPNSTG 325

Query: 198 LLSANDVLRLREFREAIDTIFTVNYAEGSNIKASSQRGTNSDEFGTEKVVDDDHLWSYWA 19
           L+S +D  RLREFR AIDTIF+ N A+    KASSQRG    +FG + V+D DHLW+YWA
Sbjct: 326 LVSEDDAQRLREFRGAIDTIFSTNLADKCLTKASSQRGDQDSDFGPQNVLDSDHLWTYWA 385

Query: 18  PGDE 7
           P DE
Sbjct: 386 PKDE 389


>ref|XP_002510887.1| alpha-l-fucosidase, putative [Ricinus communis]
           gi|223550002|gb|EEF51489.1| alpha-l-fucosidase, putative
           [Ricinus communis]
          Length = 484

 Score =  390 bits (1001), Expect = e-106
 Identities = 180/244 (73%), Positives = 203/244 (83%), Gaps = 1/244 (0%)
 Frame = -2

Query: 735 VDVGLYLSPWDRHEKRYGHEIEYNEYYLGQLQELLNRYGSVQEIWFDGAKGSNAPNMSYY 556
           +DVGLYLSPWDRH++RYGH ++YNEYYL QLQELL +YGSV+EIWFDGAKGSNAPNMSYY
Sbjct: 147 IDVGLYLSPWDRHDRRYGHNLQYNEYYLAQLQELLTKYGSVREIWFDGAKGSNAPNMSYY 206

Query: 555 FNDWFSMVKELQGSINIFSDAGLDVRWVGNEKGYAGRTCWSTINRTLITIG-GNMEDYLN 379
           F DWF+MVKELQ SINIFSDAG DVRWVGNE G+AG TCWSTIN T ++IG G+  DYLN
Sbjct: 207 FWDWFAMVKELQSSINIFSDAGPDVRWVGNENGFAGNTCWSTINLTSLSIGNGSTVDYLN 266

Query: 378 KGDPRGTDWLPAECDVSIRTGWFWHKNQTAKPLSHLLNIFYKSVGRNCVLLLNVPPNTMG 199
            GDP+GTDWLPAECDVSIR GWFWHK+QT K LS LL I+Y SVGRNCVLLLNVPPNT G
Sbjct: 267 TGDPKGTDWLPAECDVSIRKGWFWHKSQTPKKLSKLLEIYYNSVGRNCVLLLNVPPNTTG 326

Query: 198 LLSANDVLRLREFREAIDTIFTVNYAEGSNIKASSQRGTNSDEFGTEKVVDDDHLWSYWA 19
           L+S +DV RL+EFR AIDTIF  N AE   +K SSQRG     FG E ++D DHLW+YW 
Sbjct: 327 LISYSDVQRLKEFRTAIDTIFATNLAEKCFLKVSSQRGGKDGGFGPENLLDSDHLWTYWV 386

Query: 18  PGDE 7
           P +E
Sbjct: 387 PRNE 390


>ref|XP_002270630.2| PREDICTED: alpha-L-fucosidase 1-like [Vitis vinifera]
          Length = 493

 Score =  382 bits (981), Expect = e-104
 Identities = 175/246 (71%), Positives = 203/246 (82%), Gaps = 1/246 (0%)
 Frame = -2

Query: 735 VDVGLYLSPWDRHEKRYGHEIEYNEYYLGQLQELLNRYGSVQEIWFDGAKGSNAPNMSYY 556
           VDVGLYLSPWDRH++RYG E +YNEYYL QLQELL+ YG+V+EIWFDGAKG+NAPNMSY 
Sbjct: 145 VDVGLYLSPWDRHDRRYGKEKQYNEYYLAQLQELLHEYGNVREIWFDGAKGANAPNMSYD 204

Query: 555 FNDWFSMVKELQGSINIFSDAGLDVRWVGNEKGYAGRTCWSTINRTLITIG-GNMEDYLN 379
           F DWF+MV+ELQ SINIFSDAG DVRWVGNEKG+AG TCWSTINRT ++IG  ++ DY+N
Sbjct: 205 FGDWFAMVRELQTSINIFSDAGPDVRWVGNEKGFAGSTCWSTINRTSLSIGNASIVDYIN 264

Query: 378 KGDPRGTDWLPAECDVSIRTGWFWHKNQTAKPLSHLLNIFYKSVGRNCVLLLNVPPNTMG 199
            GDP+GTDWLP ECDVSIR GWFWHK+Q  K LS LL I+Y SVGRNCVLL NVPPNT G
Sbjct: 265 TGDPKGTDWLPPECDVSIRPGWFWHKSQKPKKLSKLLEIYYNSVGRNCVLLFNVPPNTTG 324

Query: 198 LLSANDVLRLREFREAIDTIFTVNYAEGSNIKASSQRGTNSDEFGTEKVVDDDHLWSYWA 19
           L+S  DV RLREFR A+DTIF+ N  E   IKASS+RG    +FG E V+D DHLW++WA
Sbjct: 325 LISETDVQRLREFRNAVDTIFSTNLVENGAIKASSRRGGKDSDFGPENVLDSDHLWTFWA 384

Query: 18  PGDESN 1
           P +E +
Sbjct: 385 PREEDD 390


>ref|XP_004164690.1| PREDICTED: alpha-L-fucosidase 1-like [Cucumis sativus]
          Length = 509

 Score =  379 bits (972), Expect = e-103
 Identities = 171/244 (70%), Positives = 200/244 (81%), Gaps = 1/244 (0%)
 Frame = -2

Query: 735 VDVGLYLSPWDRHEKRYGHEIEYNEYYLGQLQELLNRYGSVQEIWFDGAKGSNAPNMSYY 556
           +DVGLYLSPWDRH++RY H++ YNEYYL QLQELL RYG+V+EIWFDGAKG NAPNMSYY
Sbjct: 149 IDVGLYLSPWDRHDRRYSHDLPYNEYYLAQLQELLKRYGNVKEIWFDGAKGQNAPNMSYY 208

Query: 555 FNDWFSMVKELQGSINIFSDAGLDVRWVGNEKGYAGRTCWSTINRTLITIGG-NMEDYLN 379
           F+DWF+MVKELQ SINIFSDAG DVRWVGNEKG+AG +CWSTINRT + IG   +  YLN
Sbjct: 209 FSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGITPYLN 268

Query: 378 KGDPRGTDWLPAECDVSIRTGWFWHKNQTAKPLSHLLNIFYKSVGRNCVLLLNVPPNTMG 199
           KGDPRG DW+P ECDVSIR GWFWHK Q+ K L HLL I+YKSVGRNCVLL+NVPPN+ G
Sbjct: 269 KGDPRGRDWVPPECDVSIREGWFWHKTQSPKTLEHLLKIYYKSVGRNCVLLINVPPNSTG 328

Query: 198 LLSANDVLRLREFREAIDTIFTVNYAEGSNIKASSQRGTNSDEFGTEKVVDDDHLWSYWA 19
           L+   D   L++F+  ID IFT N A+  +IKASSQRG    EFG + V+DDDHLW+YWA
Sbjct: 329 LIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRG---QEFGPQNVIDDDHLWTYWA 385

Query: 18  PGDE 7
           P ++
Sbjct: 386 PKED 389


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