BLASTX nr result

ID: Coptis24_contig00024993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024993
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272595.1| PREDICTED: uncharacterized protein LOC100265...   172   2e-41
emb|CBI21319.3| unnamed protein product [Vitis vinifera]              172   2e-41
ref|XP_004170598.1| PREDICTED: uncharacterized protein LOC101229...   165   4e-39
ref|XP_004140544.1| PREDICTED: uncharacterized protein LOC101219...   165   4e-39
ref|XP_002299330.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37

>ref|XP_002272595.1| PREDICTED: uncharacterized protein LOC100265200 [Vitis vinifera]
          Length = 180

 Score =  172 bits (437), Expect = 2e-41
 Identities = 80/111 (72%), Positives = 98/111 (88%)
 Frame = -3

Query: 447 GVKVHINCKFNAISPTTTEQITFSVNRTTDKFGIYKLEIPSVDGIKCAEEQSVQSSCQAS 268
           GV+V+I CKF AISP TTEQI+FSV RTTDKFG+YKLEIPSV+GI+CA + +++SSCQAS
Sbjct: 69  GVEVNIECKFQAISPRTTEQISFSVTRTTDKFGVYKLEIPSVEGIECASDSAIESSCQAS 128

Query: 267 LVETTSSVCNIPGLKTTSDQMAFKSKQANVCYYSLNALNYRPPKRDTNLCG 115
           L+ ++SS CN+PG KTT+D++A KSKQANVC YSLNALNYRP +RDT LCG
Sbjct: 129 LMWSSSSSCNVPGHKTTTDEIAIKSKQANVCIYSLNALNYRPSERDTALCG 179


>emb|CBI21319.3| unnamed protein product [Vitis vinifera]
          Length = 167

 Score =  172 bits (437), Expect = 2e-41
 Identities = 80/111 (72%), Positives = 98/111 (88%)
 Frame = -3

Query: 447 GVKVHINCKFNAISPTTTEQITFSVNRTTDKFGIYKLEIPSVDGIKCAEEQSVQSSCQAS 268
           GV+V+I CKF AISP TTEQI+FSV RTTDKFG+YKLEIPSV+GI+CA + +++SSCQAS
Sbjct: 56  GVEVNIECKFQAISPRTTEQISFSVTRTTDKFGVYKLEIPSVEGIECASDSAIESSCQAS 115

Query: 267 LVETTSSVCNIPGLKTTSDQMAFKSKQANVCYYSLNALNYRPPKRDTNLCG 115
           L+ ++SS CN+PG KTT+D++A KSKQANVC YSLNALNYRP +RDT LCG
Sbjct: 116 LMWSSSSSCNVPGHKTTTDEIAIKSKQANVCIYSLNALNYRPSERDTALCG 166


>ref|XP_004170598.1| PREDICTED: uncharacterized protein LOC101229108, partial [Cucumis
           sativus]
          Length = 314

 Score =  165 bits (417), Expect = 4e-39
 Identities = 74/125 (59%), Positives = 100/125 (80%)
 Frame = -3

Query: 447 GVKVHINCKFNAISPTTTEQITFSVNRTTDKFGIYKLEIPSVDGIKCAEEQSVQSSCQAS 268
           GV VH+ CKF AI+P   EQ+ FSVNRTTDK+G+Y+LEIPSVDGI CA+  ++QS CQAS
Sbjct: 62  GVDVHLQCKFRAIAPKMAEQMAFSVNRTTDKYGVYRLEIPSVDGINCADGMTMQSFCQAS 121

Query: 267 LVETTSSVCNIPGLKTTSDQMAFKSKQANVCYYSLNALNYRPPKRDTNLCGEYKEGMSDS 88
           L+ ++S VCN+PGL+TTS++++ KSKQ N+C +SLNAL+YRP K++ +LCG  KE + D 
Sbjct: 122 LIGSSSEVCNVPGLRTTSEEISVKSKQDNLCIFSLNALSYRPMKKNESLCGSKKEKIPDP 181

Query: 87  INSAK 73
             S+K
Sbjct: 182 FTSSK 186


>ref|XP_004140544.1| PREDICTED: uncharacterized protein LOC101219402 [Cucumis sativus]
          Length = 398

 Score =  165 bits (417), Expect = 4e-39
 Identities = 74/125 (59%), Positives = 100/125 (80%)
 Frame = -3

Query: 447 GVKVHINCKFNAISPTTTEQITFSVNRTTDKFGIYKLEIPSVDGIKCAEEQSVQSSCQAS 268
           GV VH+ CKF AI+P   EQ+ FSVNRTTDK+G+Y+LEIPSVDGI CA+  ++QS CQAS
Sbjct: 62  GVDVHLQCKFRAIAPKMAEQMAFSVNRTTDKYGVYRLEIPSVDGINCADGMTMQSFCQAS 121

Query: 267 LVETTSSVCNIPGLKTTSDQMAFKSKQANVCYYSLNALNYRPPKRDTNLCGEYKEGMSDS 88
           L+ ++S VCN+PGL+TTS++++ KSKQ N+C +SLNAL+YRP K++ +LCG  KE + D 
Sbjct: 122 LIGSSSEVCNVPGLRTTSEEISVKSKQDNLCIFSLNALSYRPMKKNESLCGSKKEKIPDP 181

Query: 87  INSAK 73
             S+K
Sbjct: 182 FTSSK 186


>ref|XP_002299330.1| predicted protein [Populus trichocarpa] gi|222846588|gb|EEE84135.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  159 bits (402), Expect = 2e-37
 Identities = 71/125 (56%), Positives = 99/125 (79%)
 Frame = -3

Query: 447 GVKVHINCKFNAISPTTTEQITFSVNRTTDKFGIYKLEIPSVDGIKCAEEQSVQSSCQAS 268
           G  VHI C FNA SP T E+I FSVNRTTD++GIYKLE+P VDG+ C E  +++S CQAS
Sbjct: 57  GADVHIQCIFNANSPKTREKIEFSVNRTTDRYGIYKLEVPEVDGVDCEEGFAIESVCQAS 116

Query: 267 LVETTSSVCNIPGLKTTSDQMAFKSKQANVCYYSLNALNYRPPKRDTNLCGEYKEGMSDS 88
           L+ ++S VCN+PGL+ ++++++ KSKQ N+C YSLNAL+YRP K++  LCG +KE + +S
Sbjct: 117 LIGSSSRVCNVPGLRISTNEISVKSKQNNLCIYSLNALSYRPSKKNITLCGSHKEELPNS 176

Query: 87  INSAK 73
           +NS+K
Sbjct: 177 LNSSK 181


Top