BLASTX nr result

ID: Coptis24_contig00024984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024984
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620351.1| hypothetical protein MTR_6g081810 [Medicago ...    58   9e-07
ref|XP_003634196.1| PREDICTED: MATE efflux family protein 6 [Vit...    57   2e-06
emb|CBI15521.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002280423.1| PREDICTED: MATE efflux family protein 6 isof...    57   2e-06
gb|AFK43870.1| unknown [Medicago truncatula]                           56   4e-06

>ref|XP_003620351.1| hypothetical protein MTR_6g081810 [Medicago truncatula]
           gi|355495366|gb|AES76569.1| hypothetical protein
           MTR_6g081810 [Medicago truncatula]
          Length = 496

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = -3

Query: 345 GLWMGIICALFVQLLMLVTIILRTDWDKEARKTMDGVKTFIIT 217
           GLW+GIICALFVQ++ L  I +RTDW+KEA+K  D V   I T
Sbjct: 449 GLWLGIICALFVQVVSLTIITIRTDWEKEAKKATDRVYDSITT 491


>ref|XP_003634196.1| PREDICTED: MATE efflux family protein 6 [Vitis vinifera]
          Length = 399

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = -3

Query: 345 GLWMGIICALFVQLLMLVTIILRTDWDKEARKTMDGVKTFIITSDTG 205
           GLW+GIICAL VQ+L L+ + LRT+W+ EA+K  D V   II  +TG
Sbjct: 350 GLWLGIICALIVQVLSLLIVTLRTNWEDEAKKATDRVYDAIIPIETG 396


>emb|CBI15521.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = -3

Query: 345 GLWMGIICALFVQLLMLVTIILRTDWDKEARKTMDGVKTFIITSDTG 205
           GLW+GIICAL VQ+L L+ + LRT+W+ EA+K  D V   II  +TG
Sbjct: 514 GLWLGIICALIVQVLSLLIVTLRTNWEDEAKKATDRVYDAIIPIETG 560


>ref|XP_002280423.1| PREDICTED: MATE efflux family protein 6 isoform 2 [Vitis vinifera]
          Length = 493

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = -3

Query: 345 GLWMGIICALFVQLLMLVTIILRTDWDKEARKTMDGVKTFIITSDTG 205
           GLW+GIICAL VQ+L L+ + LRT+W+ EA+K  D V   II  +TG
Sbjct: 444 GLWLGIICALIVQVLSLLIVTLRTNWEDEAKKATDRVYDAIIPIETG 490


>gb|AFK43870.1| unknown [Medicago truncatula]
          Length = 449

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = -3

Query: 345 GLWMGIICALFVQLLMLVTIILRTDWDKEARKTMDGVKTFIIT 217
           GLW+GIICALFVQ++ L  I +RTDW+KEA+   D V   I T
Sbjct: 402 GLWLGIICALFVQVVSLTIITIRTDWEKEAKNATDRVYDSITT 444


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