BLASTX nr result

ID: Coptis24_contig00024961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024961
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21278.3| unnamed protein product [Vitis vinifera]               74   2e-11
dbj|BAJ91190.1| predicted protein [Hordeum vulgare subsp. vulgare]     70   2e-10
ref|XP_002334749.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002314476.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|NP_001068141.2| Os11g0578100 [Oryza sativa Japonica Group] g...    69   4e-10

>emb|CBI21278.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
 Frame = -2

Query: 419 DYITDMIKVCNILCAAIV--YGCFKDWYCILEISVDADESRIRSKYEMLVKSLEPIRNVF 246
           D I+ MI VC+IL +A     GC  +WY +L+I   A E+ IR ++    + L+PI+  F
Sbjct: 42  DGISGMITVCDILSSAGYGFLGCGTNWYWVLQIMRAAGEADIRYQFHKFKRLLDPIKTSF 101

Query: 245 PGTDSALTVVKNAFDVLCDKKKRLIFD 165
           PGT+SAL ++++AF VL D +KR +FD
Sbjct: 102 PGTESALKMIQDAFSVLSDPEKRAVFD 128


>dbj|BAJ91190.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1034

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
 Frame = -2

Query: 413 ITDMIKVCNILCAAIV-YGCFKDWYCILEISVDADESRIRSKYEMLVKSLEPIRNVFPGT 237
           I+ ++ VC + CAA        DWY IL++    D + IR +Y  L  SL P +N FPG 
Sbjct: 45  ISQLLCVCTVHCAAEARVNGETDWYAILQVEATTDHANIRKQYLRLAFSLHPDKNCFPGA 104

Query: 236 DSALTVVKNAFDVLCDKKKRLIFDSERERA 147
           D+A  +V  A  +LCD+ KR  +D  R+ A
Sbjct: 105 DAAFKLVAEAHSILCDQTKRSHYDIRRQNA 134


>ref|XP_002334749.1| predicted protein [Populus trichocarpa] gi|222874714|gb|EEF11845.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
 Frame = -2

Query: 413 ITDMIKVCNILCAAI--VYGCFKDWYCILEISVDADESRIRSKYEMLVKSLEPIRNVFPG 240
           I+ M+ VC++ C A   + G   DWY IL+I   ADE+ I+ +Y      L P +N FPG
Sbjct: 44  ISQMLTVCDVHCTADKKLLGTDMDWYGILQIEETADEATIKKQYRKFALQLHPDKNQFPG 103

Query: 239 TDSALTVVKNAFDVLCDKKKRLIFDSERE 153
            +SA  ++K+A  VL DK KR + D +R+
Sbjct: 104 AESAFKLIKDAQTVLLDKGKRSLHDIKRK 132


>ref|XP_002314476.1| predicted protein [Populus trichocarpa] gi|222863516|gb|EEF00647.1|
           predicted protein [Populus trichocarpa]
          Length = 866

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
 Frame = -2

Query: 413 ITDMIKVCNILCAAI--VYGCFKDWYCILEISVDADESRIRSKYEMLVKSLEPIRNVFPG 240
           I+ M+ VC++ C A   + G   DWY IL+I   ADE+ I+ +Y      L P +N FPG
Sbjct: 44  ISQMLTVCDVHCTADKKLLGTDMDWYGILKIEETADEATIKKQYRKFALQLHPDKNQFPG 103

Query: 239 TDSALTVVKNAFDVLCDKKKRLIFDSERE 153
            +SA  ++K+A  VL DK KR + D +R+
Sbjct: 104 AESAFKLIKDAQTVLLDKGKRSLHDIKRK 132


>ref|NP_001068141.2| Os11g0578100 [Oryza sativa Japonica Group]
           gi|77551689|gb|ABA94486.1| DnaJ domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|125577603|gb|EAZ18825.1| hypothetical protein
           OsJ_34362 [Oryza sativa Japonica Group]
           gi|255680211|dbj|BAF28504.2| Os11g0578100 [Oryza sativa
           Japonica Group]
          Length = 1052

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -2

Query: 413 ITDMIKVCNILCAA-IVYGCFKDWYCILEISVDADESRIRSKYEMLVKSLEPIRNVFPGT 237
           I+ ++ +C++ CAA        DWY IL++   ADE+ IR +Y  L  SL P +N F G 
Sbjct: 44  ISQLLNICHVHCAAEATVNGQTDWYGILQVEATADEATIRKQYRKLAFSLHPDKNSFAGA 103

Query: 236 DSALTVVKNAFDVLCDKKKRLIFDSER 156
           ++A  +V  A  +LCD  KR I+D +R
Sbjct: 104 EAAFKLVAEAHSLLCDPTKRPIYDIKR 130


Top