BLASTX nr result

ID: Coptis24_contig00024953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024953
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM60880.1| immunophilin [Arabidopsis thaliana]                     59   3e-07
ref|NP_201240.1| Peptidyl-prolyl isomerase FKBP12 [Arabidopsis t...    59   3e-07
dbj|BAJ90697.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   4e-07
ref|NP_001235799.1| uncharacterized protein LOC100500283 [Glycin...    59   5e-07
ref|NP_001233825.1| CONSTANS interacting protein 3 [Solanum lyco...    58   7e-07

>gb|AAM60880.1| immunophilin [Arabidopsis thaliana]
          Length = 112

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = -1

Query: 90 MGVKKQVLKAGNGPKPVPGQSVTVHCTGFG 1
          MGV+KQV++ GNGPKP PGQ+VTVHCTGFG
Sbjct: 1  MGVEKQVIRPGNGPKPAPGQTVTVHCTGFG 30


>ref|NP_201240.1| Peptidyl-prolyl isomerase FKBP12 [Arabidopsis thaliana]
          gi|73919360|sp|Q8LGG0.2|FKB12_ARATH RecName:
          Full=Peptidyl-prolyl cis-trans isomerase FKBP12;
          Short=PPIase FKBP12; AltName: Full=12 kDa FK506-binding
          protein; Short=12 kDa FKBP; AltName: Full=FK506-binding
          protein 12; Short=AtFKBP12; AltName: Full=FKBP-12;
          AltName: Full=Immunophilin FKBP12; AltName:
          Full=Rotamase gi|2104957|gb|AAB57847.1| immunophilin
          [Arabidopsis thaliana] gi|9759411|dbj|BAB09866.1|
          immunophilin [Arabidopsis thaliana]
          gi|16649117|gb|AAL24410.1| immunophilin [Arabidopsis
          thaliana] gi|20148471|gb|AAM10126.1| immunophilin
          [Arabidopsis thaliana] gi|332010493|gb|AED97876.1|
          Peptidyl-prolyl isomerase FKBP12 [Arabidopsis thaliana]
          Length = 112

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = -1

Query: 90 MGVKKQVLKAGNGPKPVPGQSVTVHCTGFG 1
          MGV+KQV++ GNGPKP PGQ+VTVHCTGFG
Sbjct: 1  MGVEKQVIRPGNGPKPAPGQTVTVHCTGFG 30


>dbj|BAJ90697.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 196

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/32 (71%), Positives = 29/32 (90%)
 Frame = -1

Query: 96  GKMGVKKQVLKAGNGPKPVPGQSVTVHCTGFG 1
           GKMG++K++L+AG GPKPV GQ VTVHCTG+G
Sbjct: 83  GKMGIQKEILRAGTGPKPVKGQKVTVHCTGYG 114


>ref|NP_001235799.1| uncharacterized protein LOC100500283 [Glycine max]
          gi|255629932|gb|ACU15318.1| unknown [Glycine max]
          Length = 112

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 23/30 (76%), Positives = 29/30 (96%)
 Frame = -1

Query: 90 MGVKKQVLKAGNGPKPVPGQSVTVHCTGFG 1
          MGV+KQ+L++G GPKP+PGQ+VTVHCTGFG
Sbjct: 1  MGVEKQLLRSGTGPKPIPGQNVTVHCTGFG 30


>ref|NP_001233825.1| CONSTANS interacting protein 3 [Solanum lycopersicum]
          gi|45544871|gb|AAS67371.1| CONSTANS interacting protein
          3 [Solanum lycopersicum]
          Length = 112

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/30 (76%), Positives = 29/30 (96%)
 Frame = -1

Query: 90 MGVKKQVLKAGNGPKPVPGQSVTVHCTGFG 1
          MGV+K+V++AGNGPKP PGQ+VTVHCTG+G
Sbjct: 1  MGVEKEVIRAGNGPKPQPGQTVTVHCTGYG 30


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