BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024948
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281970.1| PREDICTED: U-box domain-containing protein 2...    75   4e-12
emb|CAN83909.1| hypothetical protein VITISV_035044 [Vitis vinifera]    75   4e-12
ref|XP_002517222.1| E3 ubiquitin ligase PUB14, putative [Ricinus...    71   1e-10
ref|XP_002328478.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002309886.1| photoperiod-response-like protein [Populus t...    64   1e-08

>ref|XP_002281970.1| PREDICTED: U-box domain-containing protein 27 [Vitis vinifera]
          Length = 412

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 49/106 (46%), Positives = 63/106 (59%), Gaps = 13/106 (12%)
 Frame = -2

Query: 280 KDFVPNHNLHRLIQIWSNSDSQSQNC---------LISRQEIRDLVNKIESCSDDEFK-- 134
           KDFVPNH L RLIQIWSNS     N           +S  + RDL+ +IES  +D  +  
Sbjct: 61  KDFVPNHTLQRLIQIWSNSVRHRSNSPDSPIQLVPSLSPDQARDLIKEIESKPEDCLECM 120

Query: 133 -EIIEFAKVSDENLKFLACLEGFVLVLVDVL-SRNEELKKKEQVIR 2
            +II FA+ S+E+ KFLA ++GFV +LVD L S N      EQV+R
Sbjct: 121 SKIICFARESEESRKFLARIDGFVSLLVDFLGSGNANFLALEQVVR 166


>emb|CAN83909.1| hypothetical protein VITISV_035044 [Vitis vinifera]
          Length = 383

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 49/106 (46%), Positives = 63/106 (59%), Gaps = 13/106 (12%)
 Frame = -2

Query: 280 KDFVPNHNLHRLIQIWSNSDSQSQNC---------LISRQEIRDLVNKIESCSDDEFK-- 134
           KDFVPNH L RLIQIWSNS     N           +S  + RDL+ +IES  +D  +  
Sbjct: 61  KDFVPNHTLQRLIQIWSNSVRHRSNSPDSPIQLVPSLSPDQARDLIKEIESKPEDCLECM 120

Query: 133 -EIIEFAKVSDENLKFLACLEGFVLVLVDVL-SRNEELKKKEQVIR 2
            +II FA+ S+E+ KFLA ++GFV +LVD L S N      EQV+R
Sbjct: 121 SKIICFARESEESRKFLARIDGFVSLLVDFLGSGNANFLALEQVVR 166


>ref|XP_002517222.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223543593|gb|EEF45122.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 412

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 14/107 (13%)
 Frame = -2

Query: 280 KDFVPNHNLHRLIQIWSNS----------DSQSQNCLI-SRQEIRDLVNKIES--CSDDE 140
           KDFVPN  L RLIQIWS+S          DS   N ++ S+ EI+ +V  IE   C  D+
Sbjct: 61  KDFVPNRTLQRLIQIWSDSVEHYQSHRRVDSAVDNSVVPSQDEIKCIVEDIEKNRCCFDD 120

Query: 139 FKEIIEFAKVSDENLKFLACLEGFVLVLVDVL-SRNEELKKKEQVIR 2
            ++I+ F + S+EN  FLA ++GFV +LVD L  + +++   EQV+R
Sbjct: 121 LRKIMCFGEESEENRSFLAKMDGFVEMLVDFLGDKKDDINFIEQVVR 167


>ref|XP_002328478.1| predicted protein [Populus trichocarpa] gi|222838193|gb|EEE76558.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
 Frame = -2

Query: 280 KDFVPNHNLHRLIQIWSNSDSQSQNCLISRQEIRDLVNKIESCSD--DEFKEIIEFAKVS 107
           K+FVPN  L RLIQIWS+S  Q+QN L  R+E+  LV ++ +     D   + I FAK S
Sbjct: 62  KEFVPNRTLQRLIQIWSDS-VQTQNDL--REEVEVLVKEMRAQKGKVDHLSKFICFAKES 118

Query: 106 DENLKFLACLEGFVLVLVDVLSRNEELKKKEQVIR 2
           +EN +FLA  +GFV +LV  L  ++++   E+V+R
Sbjct: 119 EENCEFLAKFDGFVEMLVGFLDGDKDIDFLERVVR 153


>ref|XP_002309886.1| photoperiod-response-like protein [Populus trichocarpa]
           gi|224093344|ref|XP_002309891.1|
           photoperiod-response-like protein [Populus trichocarpa]
           gi|222852789|gb|EEE90336.1| photoperiod-response-like
           protein [Populus trichocarpa]
           gi|222852794|gb|EEE90341.1| photoperiod-response-like
           protein [Populus trichocarpa]
          Length = 414

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/103 (37%), Positives = 63/103 (61%), Gaps = 10/103 (9%)
 Frame = -2

Query: 280 KDFVPNHNLHRLIQIWSNS-DSQSQN-------CLISRQEIRDLVNKIESCSD--DEFKE 131
           K+FVPN  L RLI+IWS+S  +Q  N        +++R++I  LV ++ +  D  D   +
Sbjct: 62  KEFVPNRTLQRLIKIWSDSVQTQKDNRVDSAASSVVTREDIEVLVKEMRAKKDKTDRLSK 121

Query: 130 IIEFAKVSDENLKFLACLEGFVLVLVDVLSRNEELKKKEQVIR 2
            I FAK S+EN +FLA  +GFV +LV  L  ++++   E+V++
Sbjct: 122 FICFAKESEENCEFLAKFDGFVEMLVGFLVGDKDINFLERVVK 164