BLASTX nr result

ID: Coptis24_contig00024943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024943
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279681.1| PREDICTED: uncharacterized protein LOC100252...    75   1e-11
ref|XP_004152755.1| PREDICTED: uncharacterized protein LOC101210...    65   1e-08
ref|XP_002510556.1| protein with unknown function [Ricinus commu...    62   1e-07
ref|NP_001045592.1| Os02g0101800 [Oryza sativa Japonica Group] g...    60   6e-07
ref|XP_002893087.1| hypothetical protein ARALYDRAFT_335256 [Arab...    60   6e-07

>ref|XP_002279681.1| PREDICTED: uncharacterized protein LOC100252261 [Vitis vinifera]
          Length = 1273

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 57/194 (29%), Positives = 97/194 (50%)
 Frame = +3

Query: 63   LQQLELLNGSISSSRSIKVETNQNAQREECCIELEGMKRKEQVMQNFSKALWNVLKEYKR 242
            L++   +   + S R+ K++   +   +   +EL   +R  Q+MQ F+KALW+VLK+YK 
Sbjct: 500  LKETGTVKALVQSPRNSKLDVYDSTFLKLNGVELAKRERNNQIMQGFAKALWDVLKQYKE 559

Query: 243  KLEDSRNEVQFLKRSLEEKNAQSVELETEIEDLKSCSLHLNQQSAEASSVIQTECIGVAV 422
            KLE S N+VQ L+ SL+ + A+  EL+ E++DLKS      ++  E++   +     + V
Sbjct: 560  KLEVSENQVQSLRESLKSEKAKYFELDKEMKDLKSHCSCCKEKVVESTLPKENSNSELTV 619

Query: 423  DSNLSFEDLEENASQSSGSSAVHGRVVKDKKDIEHEEVKKELLSTDKAERGLWCSDLFVS 602
            D +     LE + S +     +   +  D +  EH     +  S+ + E      D F+ 
Sbjct: 620  DDS---SQLEGHGSSNIDEINMGVSLNLDLEAFEHGSTPAKCDSSVQQE-----LDAFL- 670

Query: 603  SSTEQSLVGDGSCL 644
               E S + D SCL
Sbjct: 671  -QVESSDMVDSSCL 683


>ref|XP_004152755.1| PREDICTED: uncharacterized protein LOC101210482 [Cucumis sativus]
          Length = 894

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 39/105 (37%), Positives = 61/105 (58%)
 Frame = +3

Query: 159 ELEGMKRKEQVMQNFSKALWNVLKEYKRKLEDSRNEVQFLKRSLEEKNAQSVELETEIED 338
           EL G++R   +MQNFSKA+W  LK+Y+ KL+ + NE Q L+  + ++  +  ELE + + 
Sbjct: 533 ELAGIERNHLIMQNFSKAIWKTLKQYRDKLKSAENENQILREEIRQEKMRYFELEKKWQS 592

Query: 339 LKSCSLHLNQQSAEASSVIQTECIGVAVDSNLSFEDLEENASQSS 473
            + CS    +  AEA S ++     VA D  L+  DLEE+   +S
Sbjct: 593 SR-CSTCSKKDCAEADSSVE-----VASDFELN-SDLEEHRFNNS 630


>ref|XP_002510556.1| protein with unknown function [Ricinus communis]
           gi|223551257|gb|EEF52743.1| protein with unknown
           function [Ricinus communis]
          Length = 944

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/94 (35%), Positives = 57/94 (60%)
 Frame = +3

Query: 105 RSIKVETNQNAQREECCIELEGMKRKEQVMQNFSKALWNVLKEYKRKLEDSRNEVQFLKR 284
           R  K+++ + A  +  C +L   +R  ++MQ+F+KALWNVLKEYK KL  +   ++    
Sbjct: 503 RITKLDSVEIAPVKSDCNDLAMRERNHKIMQSFAKALWNVLKEYKGKLMVAEKTIE---- 558

Query: 285 SLEEKNAQSVELETEIEDLKSCSLHLNQQSAEAS 386
           +L  + ++ +ELE ++ED KSC     + SA+ +
Sbjct: 559 NLRSEKSKYLELEQKLEDFKSCCTCSQKNSAKTT 592


>ref|NP_001045592.1| Os02g0101800 [Oryza sativa Japonica Group]
           gi|41052895|dbj|BAD07807.1| putative kinesin [Oryza
           sativa Japonica Group] gi|41053229|dbj|BAD08190.1|
           putative kinesin [Oryza sativa Japonica Group]
           gi|113535123|dbj|BAF07506.1| Os02g0101800 [Oryza sativa
           Japonica Group]
          Length = 769

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 31/87 (35%), Positives = 51/87 (58%)
 Frame = +3

Query: 93  ISSSRSIKVETNQNAQREECCIELEGMKRKEQVMQNFSKALWNVLKEYKRKLEDSRNEVQ 272
           I     + +     +Q +    EL  + R E++M NF++ALW VLK+YK+KL +S N V+
Sbjct: 306 IDKDDGVTISEKDESQYKLLNSELRRVSRNEEIMTNFARALWTVLKQYKQKLLESENAVE 365

Query: 273 FLKRSLEEKNAQSVELETEIEDLKSCS 353
             +  L  K+ + +ELE +++ L SCS
Sbjct: 366 STRELLRSKDIKIMELEKKLKVL-SCS 391


>ref|XP_002893087.1| hypothetical protein ARALYDRAFT_335256 [Arabidopsis lyrata subsp.
           lyrata] gi|297338929|gb|EFH69346.1| hypothetical protein
           ARALYDRAFT_335256 [Arabidopsis lyrata subsp. lyrata]
          Length = 960

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 29/61 (47%), Positives = 41/61 (67%)
 Frame = +3

Query: 174 KRKEQVMQNFSKALWNVLKEYKRKLEDSRNEVQFLKRSLEEKNAQSVELETEIEDLKSCS 353
           +R+  +M+NFSK LWNVLK+Y  KL+ +  E+  LK SL  +  +S+ LETE+  LKS  
Sbjct: 484 EREHIIMRNFSKVLWNVLKQYNEKLKVAEGEICTLKDSLRREQLKSLVLETELSSLKSSC 543

Query: 354 L 356
           L
Sbjct: 544 L 544