BLASTX nr result

ID: Coptis24_contig00024935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024935
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18365.3| unnamed protein product [Vitis vinifera]              250   7e-65
ref|XP_002270034.1| PREDICTED: uncharacterized protein LOC100241...   250   7e-65
ref|XP_002310343.1| predicted protein [Populus trichocarpa] gi|2...   238   3e-61
ref|XP_002884937.1| hypothetical protein ARALYDRAFT_318072 [Arab...   238   5e-61
dbj|BAJ33667.1| unnamed protein product [Thellungiella halophila]     236   2e-60

>emb|CBI18365.3| unnamed protein product [Vitis vinifera]
          Length = 629

 Score =  250 bits (639), Expect = 7e-65
 Identities = 124/163 (76%), Positives = 143/163 (87%)
 Frame = -2

Query: 489 KAAYTVGGYSFTAAAIEYGILKMKPPVYRPQTALLLALHKLKVPEKLHKFSIDAIEPLVA 310
           KAAYTVGG+SF+AAAIEY ILKMKPPV+RPQ ALLLALHKLKV E+L K +ID  EPLVA
Sbjct: 453 KAAYTVGGHSFSAAAIEYVILKMKPPVHRPQIALLLALHKLKVSEELRKSAIDTCEPLVA 512

Query: 309 FALSNGMYSSPAVRIYTAENVEEELHEAQRDFIRAAVGISNKGRLLVPKMLHSFARGIIE 130
           FALS GMYSSP++RIYTA+ V EEL EAQRDFIRA+VG+S+KGRLLVPKMLH FA+G ++
Sbjct: 513 FALSCGMYSSPSIRIYTAKKVREELQEAQRDFIRASVGLSSKGRLLVPKMLHCFAKGFVD 572

Query: 129 DSSLALWISTYLLPHQAAFIEQCMSKRRQLWLSSCNCGILPFD 1
           D+ LA+WIS YL PHQAAF+EQC+S+RRQ  L S NCGILPFD
Sbjct: 573 DAKLAVWISHYLPPHQAAFVEQCISRRRQSLLGSRNCGILPFD 615


>ref|XP_002270034.1| PREDICTED: uncharacterized protein LOC100241082 [Vitis vinifera]
          Length = 566

 Score =  250 bits (639), Expect = 7e-65
 Identities = 124/163 (76%), Positives = 143/163 (87%)
 Frame = -2

Query: 489 KAAYTVGGYSFTAAAIEYGILKMKPPVYRPQTALLLALHKLKVPEKLHKFSIDAIEPLVA 310
           KAAYTVGG+SF+AAAIEY ILKMKPPV+RPQ ALLLALHKLKV E+L K +ID  EPLVA
Sbjct: 390 KAAYTVGGHSFSAAAIEYVILKMKPPVHRPQIALLLALHKLKVSEELRKSAIDTCEPLVA 449

Query: 309 FALSNGMYSSPAVRIYTAENVEEELHEAQRDFIRAAVGISNKGRLLVPKMLHSFARGIIE 130
           FALS GMYSSP++RIYTA+ V EEL EAQRDFIRA+VG+S+KGRLLVPKMLH FA+G ++
Sbjct: 450 FALSCGMYSSPSIRIYTAKKVREELQEAQRDFIRASVGLSSKGRLLVPKMLHCFAKGFVD 509

Query: 129 DSSLALWISTYLLPHQAAFIEQCMSKRRQLWLSSCNCGILPFD 1
           D+ LA+WIS YL PHQAAF+EQC+S+RRQ  L S NCGILPFD
Sbjct: 510 DAKLAVWISHYLPPHQAAFVEQCISRRRQSLLGSRNCGILPFD 552


>ref|XP_002310343.1| predicted protein [Populus trichocarpa] gi|222853246|gb|EEE90793.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  238 bits (608), Expect = 3e-61
 Identities = 117/163 (71%), Positives = 141/163 (86%)
 Frame = -2

Query: 489 KAAYTVGGYSFTAAAIEYGILKMKPPVYRPQTALLLALHKLKVPEKLHKFSIDAIEPLVA 310
           KAAYT+GG+ F+AAAIEY ILKMKPP++RPQ ALLLALHKL++ E+  K  IDA EPLVA
Sbjct: 269 KAAYTIGGHYFSAAAIEYVILKMKPPLHRPQIALLLALHKLRLSEEQQKSVIDAHEPLVA 328

Query: 309 FALSNGMYSSPAVRIYTAENVEEELHEAQRDFIRAAVGISNKGRLLVPKMLHSFARGIIE 130
           FALS GMYSSPAVR++TA+NV EEL EAQ DFIRA+ G+SNKG+LLVPKMLH FA+G ++
Sbjct: 329 FALSCGMYSSPAVRVFTAKNVREELQEAQHDFIRASAGVSNKGKLLVPKMLHCFAKGFVD 388

Query: 129 DSSLALWISTYLLPHQAAFIEQCMSKRRQLWLSSCNCGILPFD 1
           D++LA+WIS YL P+QAAF+EQC+S+RRQ  L S NCGILPFD
Sbjct: 389 DTNLAVWISHYLPPNQAAFVEQCISQRRQSLLGSRNCGILPFD 431


>ref|XP_002884937.1| hypothetical protein ARALYDRAFT_318072 [Arabidopsis lyrata subsp.
           lyrata] gi|297330777|gb|EFH61196.1| hypothetical protein
           ARALYDRAFT_318072 [Arabidopsis lyrata subsp. lyrata]
          Length = 582

 Score =  238 bits (606), Expect = 5e-61
 Identities = 116/163 (71%), Positives = 142/163 (87%)
 Frame = -2

Query: 489 KAAYTVGGYSFTAAAIEYGILKMKPPVYRPQTALLLALHKLKVPEKLHKFSIDAIEPLVA 310
           KAAYTVGG+S+TAA +EY ILKMKPP++RPQ ALLLA+HK+KV E+  + SID  EPL+ 
Sbjct: 405 KAAYTVGGHSYTAATMEYVILKMKPPMHRPQIALLLAIHKMKVSEEQRRASIDTHEPLLG 464

Query: 309 FALSNGMYSSPAVRIYTAENVEEELHEAQRDFIRAAVGISNKGRLLVPKMLHSFARGIIE 130
           FALS GMYSSPAVRIYTA+ V+EEL EAQRDFI+A+VG+S+KG+LLVPKMLH +A+ ++E
Sbjct: 465 FALSCGMYSSPAVRIYTAKGVKEELLEAQRDFIQASVGLSSKGKLLVPKMLHCYAKSLVE 524

Query: 129 DSSLALWISTYLLPHQAAFIEQCMSKRRQLWLSSCNCGILPFD 1
           DSSL +WIS YL PHQAAF+EQC+S+RRQ  L+S NCGILPFD
Sbjct: 525 DSSLGVWISRYLPPHQAAFVEQCISQRRQSLLASRNCGILPFD 567


>dbj|BAJ33667.1| unnamed protein product [Thellungiella halophila]
          Length = 590

 Score =  236 bits (601), Expect = 2e-60
 Identities = 115/163 (70%), Positives = 141/163 (86%)
 Frame = -2

Query: 489 KAAYTVGGYSFTAAAIEYGILKMKPPVYRPQTALLLALHKLKVPEKLHKFSIDAIEPLVA 310
           KAAYTVGG+S+TAA +EY ILKMKPP++RPQ ALLLA+HKLK+ E+  K SI   EPL+A
Sbjct: 412 KAAYTVGGHSYTAATMEYVILKMKPPMHRPQIALLLAIHKLKISEEQRKASIGTHEPLLA 471

Query: 309 FALSNGMYSSPAVRIYTAENVEEELHEAQRDFIRAAVGISNKGRLLVPKMLHSFARGIIE 130
           FALS GMYSSPAVR+YTA+ V+EEL EAQRDFI+A+VG+S+KG+LLVPKMLH +A+  +E
Sbjct: 472 FALSCGMYSSPAVRVYTAKGVKEELLEAQRDFIQASVGLSSKGKLLVPKMLHCYAKSFVE 531

Query: 129 DSSLALWISTYLLPHQAAFIEQCMSKRRQLWLSSCNCGILPFD 1
           DS+L +WIS YL PHQAAF+EQC+S+RRQ  L+S NCGILPFD
Sbjct: 532 DSNLGVWISKYLPPHQAAFVEQCISQRRQSLLASRNCGILPFD 574


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