BLASTX nr result
ID: Coptis24_contig00024925
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024925 (562 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI23729.3| unnamed protein product [Vitis vinifera] 277 7e-73 ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266... 277 7e-73 ref|XP_002528340.1| ATP binding protein, putative [Ricinus commu... 276 2e-72 ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|2... 271 4e-71 gb|AAX53097.1| DNA mismatch repair protein [Solanum lycopersicum] 255 3e-66 >emb|CBI23729.3| unnamed protein product [Vitis vinifera] Length = 1114 Score = 277 bits (709), Expect = 7e-73 Identities = 133/187 (71%), Positives = 156/187 (83%) Frame = +1 Query: 1 KRPRPLHLGTATQIGALPTEGIPSLLKVLFPSNCSGLPMLYVRDLLLNPPTFEIAVEIQE 180 KRPR LHLGTATQIGA+PTEGIP LLKVL PSNC+GLP+LYVRDLLLNPP +EIA IQ Sbjct: 363 KRPRSLHLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPLLYVRDLLLNPPAYEIASIIQA 422 Query: 181 TCKLMSNVMCSIPEFTCVSAAXXXXXXXXXXXNHIEFCRIKNVVDEILQMHRNSELHRIL 360 TC+LM+NV CSIPEFTCVS A NHIEFCRIK+V+DEILQMHRNS+L++IL Sbjct: 423 TCRLMNNVTCSIPEFTCVSPAKLVKLLELREANHIEFCRIKSVLDEILQMHRNSDLNKIL 482 Query: 361 QLLFKPTWFATGLNIEFESLVNECERVSDKIGEMISLDGENDQKMSSSHVIPSDFFEAIE 540 +LL PTW ATGL I+F++LVNECE +S +IG+MI LDGENDQK+S +IP+DFFE +E Sbjct: 483 KLLMDPTWVATGLKIDFDTLVNECEWISARIGKMIFLDGENDQKISYHPIIPNDFFEDME 542 Query: 541 SPWRGRV 561 SPW+GRV Sbjct: 543 SPWKGRV 549 >ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266612 [Vitis vinifera] Length = 1144 Score = 277 bits (709), Expect = 7e-73 Identities = 133/187 (71%), Positives = 156/187 (83%) Frame = +1 Query: 1 KRPRPLHLGTATQIGALPTEGIPSLLKVLFPSNCSGLPMLYVRDLLLNPPTFEIAVEIQE 180 KRPR LHLGTATQIGA+PTEGIP LLKVL PSNC+GLP+LYVRDLLLNPP +EIA IQ Sbjct: 363 KRPRSLHLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPLLYVRDLLLNPPAYEIASIIQA 422 Query: 181 TCKLMSNVMCSIPEFTCVSAAXXXXXXXXXXXNHIEFCRIKNVVDEILQMHRNSELHRIL 360 TC+LM+NV CSIPEFTCVS A NHIEFCRIK+V+DEILQMHRNS+L++IL Sbjct: 423 TCRLMNNVTCSIPEFTCVSPAKLVKLLELREANHIEFCRIKSVLDEILQMHRNSDLNKIL 482 Query: 361 QLLFKPTWFATGLNIEFESLVNECERVSDKIGEMISLDGENDQKMSSSHVIPSDFFEAIE 540 +LL PTW ATGL I+F++LVNECE +S +IG+MI LDGENDQK+S +IP+DFFE +E Sbjct: 483 KLLMDPTWVATGLKIDFDTLVNECEWISARIGKMIFLDGENDQKISYHPIIPNDFFEDME 542 Query: 541 SPWRGRV 561 SPW+GRV Sbjct: 543 SPWKGRV 549 >ref|XP_002528340.1| ATP binding protein, putative [Ricinus communis] gi|223532208|gb|EEF34012.1| ATP binding protein, putative [Ricinus communis] Length = 937 Score = 276 bits (705), Expect = 2e-72 Identities = 134/186 (72%), Positives = 153/186 (82%) Frame = +1 Query: 4 RPRPLHLGTATQIGALPTEGIPSLLKVLFPSNCSGLPMLYVRDLLLNPPTFEIAVEIQET 183 RPRPLHLGTATQIGA+PTEGIP LLKVL PSNC+GLP+LYVRDLLLNPP +EIA IQ T Sbjct: 367 RPRPLHLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPVLYVRDLLLNPPAYEIASTIQAT 426 Query: 184 CKLMSNVMCSIPEFTCVSAAXXXXXXXXXXXNHIEFCRIKNVVDEILQMHRNSELHRILQ 363 CKLMS++ CSIPEFTC+S+A NH+EFCRIKNV+DEIL MHRNSEL+ IL+ Sbjct: 427 CKLMSSITCSIPEFTCISSAKLVKLLELREANHLEFCRIKNVLDEILHMHRNSELNEILK 486 Query: 364 LLFKPTWFATGLNIEFESLVNECERVSDKIGEMISLDGENDQKMSSSHVIPSDFFEAIES 543 L PTW ATGL I+FE+LVNECE S +I EMISLDGE+DQK+SS VIPSDFFE +ES Sbjct: 487 SLMDPTWVATGLKIDFETLVNECEWASGRICEMISLDGEHDQKLSSYSVIPSDFFEDMES 546 Query: 544 PWRGRV 561 W+GRV Sbjct: 547 LWKGRV 552 >ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|222863550|gb|EEF00681.1| predicted protein [Populus trichocarpa] Length = 1130 Score = 271 bits (694), Expect = 4e-71 Identities = 132/186 (70%), Positives = 151/186 (81%) Frame = +1 Query: 4 RPRPLHLGTATQIGALPTEGIPSLLKVLFPSNCSGLPMLYVRDLLLNPPTFEIAVEIQET 183 RPRPLHLGTATQIGA+PTEGIP LLKVL PSNC+GLP LYVRD+LLNPP +EIA IQ T Sbjct: 364 RPRPLHLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPELYVRDMLLNPPAYEIASTIQAT 423 Query: 184 CKLMSNVMCSIPEFTCVSAAXXXXXXXXXXXNHIEFCRIKNVVDEILQMHRNSELHRILQ 363 CKLMSN+ CSIPEFTCVS+A NHIEFCRIKNV+DEIL M+RNSEL+ IL+ Sbjct: 424 CKLMSNITCSIPEFTCVSSAKLVKLLEQKEANHIEFCRIKNVLDEILFMYRNSELNEILK 483 Query: 364 LLFKPTWFATGLNIEFESLVNECERVSDKIGEMISLDGENDQKMSSSHVIPSDFFEAIES 543 L P W ATGL I+FE+LVNECE S +I EMISLDGE+DQK+SS V+PS+FFE +ES Sbjct: 484 SLMDPAWMATGLKIDFETLVNECEWASGRISEMISLDGESDQKISSCPVVPSEFFEDMES 543 Query: 544 PWRGRV 561 W+GRV Sbjct: 544 SWKGRV 549 >gb|AAX53097.1| DNA mismatch repair protein [Solanum lycopersicum] Length = 1124 Score = 255 bits (652), Expect = 3e-66 Identities = 117/186 (62%), Positives = 152/186 (81%) Frame = +1 Query: 4 RPRPLHLGTATQIGALPTEGIPSLLKVLFPSNCSGLPMLYVRDLLLNPPTFEIAVEIQET 183 RPRPLHLGTATQIGA+PTEGIP LLKVL P +CSGLP+LY+RDLLLNPP +EI+ +IQE Sbjct: 359 RPRPLHLGTATQIGAIPTEGIPCLLKVLLPPHCSGLPVLYIRDLLLNPPAYEISSDIQEA 418 Query: 184 CKLMSNVMCSIPEFTCVSAAXXXXXXXXXXXNHIEFCRIKNVVDEILQMHRNSELHRILQ 363 C+LM +V CSIP+FTC+S+A NH+EFC+IK++V+EILQ++RNSEL I++ Sbjct: 419 CRLMMSVTCSIPDFTCISSAKLVKLLELREANHVEFCKIKSMVEEILQLYRNSELRAIVE 478 Query: 364 LLFKPTWFATGLNIEFESLVNECERVSDKIGEMISLDGENDQKMSSSHVIPSDFFEAIES 543 LL PTW ATGL ++F++LVNEC ++S +I E+IS+ GENDQK+SS +IP+DFFE +E Sbjct: 479 LLMDPTWVATGLKVDFDTLVNECGKISCRISEIISVHGENDQKISSYPIIPNDFFEDMEL 538 Query: 544 PWRGRV 561 W+GRV Sbjct: 539 LWKGRV 544