BLASTX nr result

ID: Coptis24_contig00024910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024910
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264112.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    96   4e-18
emb|CBI29731.3| unnamed protein product [Vitis vinifera]               96   4e-18
emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]    96   4e-18
ref|XP_002272228.1| PREDICTED: transcription factor TCP8-like [V...    95   5e-18
ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycoper...    94   9e-18

>ref|XP_002264112.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP8-like
           [Vitis vinifera]
          Length = 538

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/61 (85%), Positives = 53/61 (86%)
 Frame = +2

Query: 2   HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSGGGSSTIATPMPSKSIASS 181
           HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRS G  STI+ P PSKS   S
Sbjct: 200 HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSG--STISAP-PSKSAPHS 256

Query: 182 F 184
           F
Sbjct: 257 F 257


>emb|CBI29731.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/61 (85%), Positives = 53/61 (86%)
 Frame = +2

Query: 2   HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSGGGSSTIATPMPSKSIASS 181
           HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRS G  STI+ P PSKS   S
Sbjct: 147 HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSG--STISAP-PSKSAPHS 203

Query: 182 F 184
           F
Sbjct: 204 F 204


>emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]
          Length = 550

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/61 (85%), Positives = 53/61 (86%)
 Frame = +2

Query: 2   HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSGGGSSTIATPMPSKSIASS 181
           HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRS G  STI+ P PSKS   S
Sbjct: 212 HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSG--STISAP-PSKSAPHS 268

Query: 182 F 184
           F
Sbjct: 269 F 269


>ref|XP_002272228.1| PREDICTED: transcription factor TCP8-like [Vitis vinifera]
          Length = 355

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 51/61 (83%), Positives = 53/61 (86%)
 Frame = +2

Query: 2   HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSGGGSSTIATPMPSKSIASS 181
           HKSDGETIEWLLQQAEPAI+AATGTGTIPANFSTLNVSLRS G  STI+ P PSKS   S
Sbjct: 104 HKSDGETIEWLLQQAEPAIVAATGTGTIPANFSTLNVSLRSSG--STISAP-PSKSAPHS 160

Query: 182 F 184
           F
Sbjct: 161 F 161


>ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycopersicum]
           gi|306416833|gb|ADM87260.1| TCP transcription factor 11
           [Solanum lycopersicum]
          Length = 523

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 50/61 (81%), Positives = 53/61 (86%)
 Frame = +2

Query: 2   HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSGGGSSTIATPMPSKSIASS 181
           HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLN+SLRS G  ST++ P PSKS   S
Sbjct: 175 HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNISLRSSG--STLSAP-PSKSAPHS 231

Query: 182 F 184
           F
Sbjct: 232 F 232


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