BLASTX nr result
ID: Coptis24_contig00024905
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024905 (245 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315346.1| predicted protein [Populus trichocarpa] gi|2... 61 8e-08 ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-a... 59 5e-07 ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-a... 55 8e-06 emb|CBI40185.3| unnamed protein product [Vitis vinifera] 55 8e-06 >ref|XP_002315346.1| predicted protein [Populus trichocarpa] gi|222864386|gb|EEF01517.1| predicted protein [Populus trichocarpa] Length = 537 Score = 61.2 bits (147), Expect = 8e-08 Identities = 30/50 (60%), Positives = 41/50 (82%), Gaps = 2/50 (4%) Frame = +2 Query: 74 KKQEGVVKAKRPFYDEQLKEQQLV--KKRKLNEEIQLPVTLQRFARKRPT 217 KK+E VV+AK+PF D+Q+KE++ V KK+K++EEI LP LQRFARK+ T Sbjct: 487 KKKEIVVRAKKPFLDQQMKEEEKVAKKKQKISEEISLPTALQRFARKKAT 536 >ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 7-like [Cucumis sativus] gi|449528879|ref|XP_004171429.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 7-like [Cucumis sativus] Length = 536 Score = 58.5 bits (140), Expect = 5e-07 Identities = 29/49 (59%), Positives = 39/49 (79%), Gaps = 1/49 (2%) Frame = +2 Query: 68 ESKKQEGVVKAKRPFYDEQLKEQQLV-KKRKLNEEIQLPVTLQRFARKR 211 E KK E + KAKRPF EQ+KE++L KK +L+EE++LP +LQRFARK+ Sbjct: 485 EKKKHEIIEKAKRPFLHEQIKEEELSRKKSRLSEEVELPKSLQRFARKK 533 >ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-associated protein 7 [Vitis vinifera] Length = 610 Score = 54.7 bits (130), Expect = 8e-06 Identities = 25/49 (51%), Positives = 39/49 (79%), Gaps = 1/49 (2%) Frame = +2 Query: 74 KKQEGVVKAKRPFYDEQLKEQQL-VKKRKLNEEIQLPVTLQRFARKRPT 217 K++E V +AK+PF + Q++E+ L KK+K++ EI+LP +LQRFARK+ T Sbjct: 561 KREEAVARAKKPFLERQMEEENLSTKKQKISGEIELPKSLQRFARKKAT 609 >emb|CBI40185.3| unnamed protein product [Vitis vinifera] Length = 536 Score = 54.7 bits (130), Expect = 8e-06 Identities = 25/49 (51%), Positives = 39/49 (79%), Gaps = 1/49 (2%) Frame = +2 Query: 74 KKQEGVVKAKRPFYDEQLKEQQL-VKKRKLNEEIQLPVTLQRFARKRPT 217 K++E V +AK+PF + Q++E+ L KK+K++ EI+LP +LQRFARK+ T Sbjct: 487 KREEAVARAKKPFLERQMEEENLSTKKQKISGEIELPKSLQRFARKKAT 535