BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024905
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315346.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-a...    59   5e-07
ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-a...    55   8e-06
emb|CBI40185.3| unnamed protein product [Vitis vinifera]               55   8e-06

>ref|XP_002315346.1| predicted protein [Populus trichocarpa] gi|222864386|gb|EEF01517.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/50 (60%), Positives = 41/50 (82%), Gaps = 2/50 (4%)
 Frame = +2

Query: 74  KKQEGVVKAKRPFYDEQLKEQQLV--KKRKLNEEIQLPVTLQRFARKRPT 217
           KK+E VV+AK+PF D+Q+KE++ V  KK+K++EEI LP  LQRFARK+ T
Sbjct: 487 KKKEIVVRAKKPFLDQQMKEEEKVAKKKQKISEEISLPTALQRFARKKAT 536


>ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like [Cucumis sativus]
           gi|449528879|ref|XP_004171429.1| PREDICTED: probable U3
           small nucleolar RNA-associated protein 7-like [Cucumis
           sativus]
          Length = 536

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/49 (59%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
 Frame = +2

Query: 68  ESKKQEGVVKAKRPFYDEQLKEQQLV-KKRKLNEEIQLPVTLQRFARKR 211
           E KK E + KAKRPF  EQ+KE++L  KK +L+EE++LP +LQRFARK+
Sbjct: 485 EKKKHEIIEKAKRPFLHEQIKEEELSRKKSRLSEEVELPKSLQRFARKK 533


>ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-associated protein 7
           [Vitis vinifera]
          Length = 610

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/49 (51%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
 Frame = +2

Query: 74  KKQEGVVKAKRPFYDEQLKEQQL-VKKRKLNEEIQLPVTLQRFARKRPT 217
           K++E V +AK+PF + Q++E+ L  KK+K++ EI+LP +LQRFARK+ T
Sbjct: 561 KREEAVARAKKPFLERQMEEENLSTKKQKISGEIELPKSLQRFARKKAT 609


>emb|CBI40185.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/49 (51%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
 Frame = +2

Query: 74  KKQEGVVKAKRPFYDEQLKEQQL-VKKRKLNEEIQLPVTLQRFARKRPT 217
           K++E V +AK+PF + Q++E+ L  KK+K++ EI+LP +LQRFARK+ T
Sbjct: 487 KREEAVARAKKPFLERQMEEENLSTKKQKISGEIELPKSLQRFARKKAT 535