BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024899
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325966.1| predicted protein [Populus trichocarpa] gi|2...   253   3e-65
ref|XP_002327279.1| predicted protein [Populus trichocarpa] gi|2...   252   1e-64
gb|ADE75637.1| unknown [Picea sitchensis]                             245   9e-63
ref|NP_565037.1| C3HC4-type RING finger protein [Arabidopsis tha...   245   9e-63
ref|XP_002264470.1| PREDICTED: RING finger protein 170 [Vitis vi...   244   2e-62

>ref|XP_002325966.1| predicted protein [Populus trichocarpa] gi|222862841|gb|EEF00348.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  253 bits (647), Expect = 3e-65
 Identities = 115/185 (62%), Positives = 141/185 (76%)
 Frame = -2

Query: 862 MEMPPDNDFCSVCHDNFDLPCQANCSHWFCSSCILRVWHHGSALQPCKCPICRRLITLLV 683
           M+ PP NDFCS+CH +F++ CQANCSHWFC  CI+ VWHHGS LQPCKCP+CRR ITLLV
Sbjct: 1   MDGPPVNDFCSICHGHFNIACQANCSHWFCGDCIMLVWHHGSVLQPCKCPLCRRQITLLV 60

Query: 682 PSEASLQNRTDPVVKETLESVERYNNLFGGGPRSLVQXXXXXXXXXXXXXRELMDPQRSL 503
           P EASL+ R+DP V E L  +ERYN+LFGG    L+Q             RE+MDPQRSL
Sbjct: 61  PGEASLRERSDPDVAEVLGKIERYNHLFGGNTSGLIQRMQDLPFLLRRLLREIMDPQRSL 120

Query: 502 PLIFRARMFFAMLVSVIYILSPIDIIPEGIVGIFGLLDDVLIGFIFFLHIAAIYRTALLS 323
           PL+ RAR++ A+++S IY++SPIDIIPEGI+GI GLLDD+L+  I FLH+AAIYR  L  
Sbjct: 121 PLVIRARVYIAVVLSAIYVISPIDIIPEGILGIVGLLDDLLVVLICFLHVAAIYRAVLHY 180

Query: 322 RHGGT 308
           RHGG+
Sbjct: 181 RHGGS 185


>ref|XP_002327279.1| predicted protein [Populus trichocarpa] gi|222835649|gb|EEE74084.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  252 bits (643), Expect = 1e-64
 Identities = 114/185 (61%), Positives = 141/185 (76%)
 Frame = -2

Query: 862 MEMPPDNDFCSVCHDNFDLPCQANCSHWFCSSCILRVWHHGSALQPCKCPICRRLITLLV 683
           M+ PP ND C++CH +F++ CQANCSHWFC  CI+ VWHHGS LQPCKCP+CRR ITLLV
Sbjct: 1   MDGPPGNDCCAICHGHFNIACQANCSHWFCGDCIMLVWHHGSVLQPCKCPLCRRQITLLV 60

Query: 682 PSEASLQNRTDPVVKETLESVERYNNLFGGGPRSLVQXXXXXXXXXXXXXRELMDPQRSL 503
           P EASL+ R DP V E L  +ERYN+LFGG   SLVQ             RE+MDPQRSL
Sbjct: 61  PGEASLRERNDPHVAEVLGKIERYNHLFGGNTSSLVQRMQDLPFLLRRLLREIMDPQRSL 120

Query: 502 PLIFRARMFFAMLVSVIYILSPIDIIPEGIVGIFGLLDDVLIGFIFFLHIAAIYRTALLS 323
           P++ +AR++ AM++S +YI+SP+DIIPEGI+GI GLLDD+LI  I FLH+AAIYR+ L  
Sbjct: 121 PVVIKARVYIAMVLSAVYIISPVDIIPEGILGIVGLLDDLLIVLICFLHVAAIYRSVLYY 180

Query: 322 RHGGT 308
           RHGG+
Sbjct: 181 RHGGS 185


>gb|ADE75637.1| unknown [Picea sitchensis]
          Length = 266

 Score =  245 bits (626), Expect = 9e-63
 Identities = 107/184 (58%), Positives = 135/184 (73%)
 Frame = -2

Query: 862 MEMPPDNDFCSVCHDNFDLPCQANCSHWFCSSCILRVWHHGSALQPCKCPICRRLITLLV 683
           M+ PP+ND CS+CHDNFDLPCQANC+HWFC  CILRVWHH SALQPCKCPICRR I LL+
Sbjct: 81  MDSPPENDCCSICHDNFDLPCQANCAHWFCGDCILRVWHHSSALQPCKCPICRRPINLLI 140

Query: 682 PSEASLQNRTDPVVKETLESVERYNNLFGGGPRSLVQXXXXXXXXXXXXXRELMDPQRSL 503
           P E++ + R  P V   L+++E+YN +FGGG     Q             RELMDPQR+L
Sbjct: 141 PCESATRRRDGPEVDSVLQNIEKYNRIFGGGSVGFFQRLRDTPLLLRRLLRELMDPQRAL 200

Query: 502 PLIFRARMFFAMLVSVIYILSPIDIIPEGIVGIFGLLDDVLIGFIFFLHIAAIYRTALLS 323
           PL+FRAR+   + +  IY+ SP+DI+PEGI+GI GLLDD+L+  + F H+A +YR+AL S
Sbjct: 201 PLVFRARIVCFLALLAIYVFSPVDILPEGILGIVGLLDDLLVVLVVFFHVATLYRSALFS 260

Query: 322 RHGG 311
           RHGG
Sbjct: 261 RHGG 264


>ref|NP_565037.1| C3HC4-type RING finger protein [Arabidopsis thaliana]
           gi|13878189|gb|AAK44172.1|AF370357_1 unknown protein
           [Arabidopsis thaliana] gi|16323398|gb|AAL15193.1|
           unknown protein [Arabidopsis thaliana]
           gi|21536916|gb|AAM61248.1| unknown [Arabidopsis
           thaliana] gi|332197164|gb|AEE35285.1| C3HC4-type RING
           finger protein [Arabidopsis thaliana]
          Length = 185

 Score =  245 bits (626), Expect = 9e-63
 Identities = 109/185 (58%), Positives = 139/185 (75%)
 Frame = -2

Query: 862 MEMPPDNDFCSVCHDNFDLPCQANCSHWFCSSCILRVWHHGSALQPCKCPICRRLITLLV 683
           M  PP+ND CS+CH +F  PCQANCSHWFC +CI+ VW HGS LQPCKCP+CRR I+LLV
Sbjct: 1   MNSPPENDLCSICHSHFTAPCQANCSHWFCGNCIMLVWRHGSTLQPCKCPLCRRHISLLV 60

Query: 682 PSEASLQNRTDPVVKETLESVERYNNLFGGGPRSLVQXXXXXXXXXXXXXRELMDPQRSL 503
           PSE ++++R D  VKE L ++E YN LFGG   SLVQ             RE+MDPQR+L
Sbjct: 61  PSEDTIRDRNDATVKEVLGNLETYNRLFGGRSSSLVQRMQDLPFLLRRLLREMMDPQRTL 120

Query: 502 PLIFRARMFFAMLVSVIYILSPIDIIPEGIVGIFGLLDDVLIGFIFFLHIAAIYRTALLS 323
           PL+ RAR++ AM++S +YI+SPIDIIPEG++G+ GLLDD+LI  I FLH+AA+YR+ L  
Sbjct: 121 PLVIRARVYIAMILSAVYIISPIDIIPEGVLGVVGLLDDLLIALICFLHVAALYRSVLYF 180

Query: 322 RHGGT 308
           RH G+
Sbjct: 181 RHAGS 185


>ref|XP_002264470.1| PREDICTED: RING finger protein 170 [Vitis vinifera]
           gi|296089528|emb|CBI39347.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  244 bits (624), Expect = 2e-62
 Identities = 118/183 (64%), Positives = 135/183 (73%)
 Frame = -2

Query: 859 EMPPDNDFCSVCHDNFDLPCQANCSHWFCSSCILRVWHHGSALQPCKCPICRRLITLLVP 680
           E PP ND CSVCH  F++P QANCSHWFC +CIL VW HGSALQPCKCP+CRR ITLLVP
Sbjct: 3   EGPPANDVCSVCHGGFNIPFQANCSHWFCGNCILLVWQHGSALQPCKCPLCRRQITLLVP 62

Query: 679 SEASLQNRTDPVVKETLESVERYNNLFGGGPRSLVQXXXXXXXXXXXXXRELMDPQRSLP 500
           + AS +   DP V   +  VERYN LFG    SL Q             RELMDPQRSLP
Sbjct: 63  AGASQRQCNDPEVSAIVGRVERYNRLFGRCDSSLFQRMRDLPFLLRRLLRELMDPQRSLP 122

Query: 499 LIFRARMFFAMLVSVIYILSPIDIIPEGIVGIFGLLDDVLIGFIFFLHIAAIYRTALLSR 320
           L+ RAR++FAML S+IYI+SP+DIIPEG+VGI GLLDD +I FI FLHIAAIYR+ L+ R
Sbjct: 123 LLIRARVYFAMLTSIIYIVSPVDIIPEGVVGILGLLDDFIIAFICFLHIAAIYRSVLVHR 182

Query: 319 HGG 311
           HGG
Sbjct: 183 HGG 185