BLASTX nr result

ID: Coptis24_contig00024892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024892
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|222847954|gb|EEE85501.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
 Frame = -1

Query: 355 GNPGRSGWGNTFRDXXXXXXXXXXXXXGITTNKMAEAAVILEGIKKALELGWTSVWVETD 176
           G  G++  G  FR+             G TT+ +AE A +  G++  LE GW++VW+E D
Sbjct: 53  GTAGKASIGGVFRNHEAEFLLGYAEPIGGTTSTIAELAALRRGLELVLENGWSNVWLEGD 112

Query: 175 SKAMTQAFQQNKVHWSMKDTWEQLKREASWIN----------ITHTWREVNFVADCMSKF 26
           SK++     + K     +   ++ +R+ S IN          +TH +RE N  AD +++ 
Sbjct: 113 SKSLVDIIVKRK-----QVRCKEAQRQVSHINLIMPELQNCVVTHVFREGNRAADKLARI 167

Query: 25  GATLR 11
           G  L+
Sbjct: 168 GHQLQ 172


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