BLASTX nr result
ID: Coptis24_contig00024892
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024892 (358 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 >ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|222847954|gb|EEE85501.1| predicted protein [Populus trichocarpa] Length = 202 Score = 55.8 bits (133), Expect = 3e-06 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 10/125 (8%) Frame = -1 Query: 355 GNPGRSGWGNTFRDXXXXXXXXXXXXXGITTNKMAEAAVILEGIKKALELGWTSVWVETD 176 G G++ G FR+ G TT+ +AE A + G++ LE GW++VW+E D Sbjct: 53 GTAGKASIGGVFRNHEAEFLLGYAEPIGGTTSTIAELAALRRGLELVLENGWSNVWLEGD 112 Query: 175 SKAMTQAFQQNKVHWSMKDTWEQLKREASWIN----------ITHTWREVNFVADCMSKF 26 SK++ + K + ++ +R+ S IN +TH +RE N AD +++ Sbjct: 113 SKSLVDIIVKRK-----QVRCKEAQRQVSHINLIMPELQNCVVTHVFREGNRAADKLARI 167 Query: 25 GATLR 11 G L+ Sbjct: 168 GHQLQ 172