BLASTX nr result

ID: Coptis24_contig00024890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024890
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_192232.5| S-locus lectin protein kinase-like protein [Ara...   117   1e-45
ref|XP_003540865.1| PREDICTED: G-type lectin S-receptor-like ser...   117   6e-44
ref|XP_003597066.1| Cysteine-rich receptor-like protein kinase [...   120   8e-42
emb|CBI17984.3| unnamed protein product [Vitis vinifera]              121   3e-37
emb|CAN70165.1| hypothetical protein VITISV_024701 [Vitis vinifera]   122   7e-35

>ref|NP_192232.5| S-locus lectin protein kinase-like protein [Arabidopsis thaliana]
            gi|332656895|gb|AEE82295.1| S-locus lectin protein
            kinase-like protein [Arabidopsis thaliana]
          Length = 1010

 Score =  117 bits (292), Expect(3) = 1e-45
 Identities = 63/133 (47%), Positives = 84/133 (63%), Gaps = 18/133 (13%)
 Frame = -3

Query: 427  TRRSLSVIIPVTTIVGLLFLGTGKMFKENGRI------------------ADKFRGNGKE 302
            T  S ++++ +++    +FL   K+ KE G I                  + +F+ +  +
Sbjct: 612  TFTSAAILVVLSSTASYVFLQRRKVNKELGSIPRGVHLCDSERHIKELIESGRFKQDDSQ 671

Query: 301  ELDVPFFDFRSIAAATENFSDSNKLGQGGFGPVYKGKLSGGQEIAVKRLSRTSGQGLEEF 122
             +DVP F+  +I  AT NFS++NKLGQGGFGPVYKG   G QEIAVKRLSR SGQGLEEF
Sbjct: 672  GIDVPSFELETILYATSNFSNANKLGQGGFGPVYKGMFPGDQEIAVKRLSRCSGQGLEEF 731

Query: 121  KTEIILIAKLQHR 83
            K E++LIAKLQHR
Sbjct: 732  KNEVVLIAKLQHR 744



 Score = 67.0 bits (162), Expect(3) = 1e-45
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = -1

Query: 600 VEIGWE*PLEPFCNLPKDCDDWPHSACMPERSGTGNRRCICISSFRWDPLAGYCTKER 427
           VEI W+ PLEP C+L  DC DWP+S+C   +SG G ++C C   F+W+     CT+ER
Sbjct: 538 VEIRWDPPLEPTCSLSADCKDWPNSSC--SKSGEGKKQCFCNHDFKWNGFNLNCTQER 593



 Score = 46.6 bits (109), Expect(3) = 1e-45
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = -1

Query: 81  NLVRLLGCCIQGDEMLLLYEYMPKKSL 1
           NLVRLLG C+ G+E LLLYEYMP KSL
Sbjct: 745 NLVRLLGYCVAGEEKLLLYEYMPHKSL 771


>ref|XP_003540865.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase At4g03230-like [Glycine max]
          Length = 991

 Score =  117 bits (293), Expect(3) = 6e-44
 Identities = 54/83 (65%), Positives = 67/83 (80%)
 Frame = -3

Query: 331 ADKFRGNGKEELDVPFFDFRSIAAATENFSDSNKLGQGGFGPVYKGKLSGGQEIAVKRLS 152
           + +F+ +  + +D+P+F   SI  AT NF+++NKLGQGGFGPVYKGK  GGQEIAVKRLS
Sbjct: 645 SSRFKEDDAQAIDIPYFHLESILDATNNFANTNKLGQGGFGPVYKGKFPGGQEIAVKRLS 704

Query: 151 RTSGQGLEEFKTEIILIAKLQHR 83
             SGQGLEEFK E++LIAKLQHR
Sbjct: 705 SCSGQGLEEFKNEVVLIAKLQHR 727



 Score = 61.2 bits (147), Expect(3) = 6e-44
 Identities = 25/55 (45%), Positives = 34/55 (61%)
 Frame = -1

Query: 600 VEIGWE*PLEPFCNLPKDCDDWPHSACMPERSGTGNRRCICISSFRWDPLAGYCT 436
           +E+ WE PLEP C+   DC +WP+S C    S  G +RC+C ++F WD L   CT
Sbjct: 565 IELSWEQPLEPICSSLLDCKEWPNSTC--NTSSDGKKRCLCNTNFLWDGLKLNCT 617



 Score = 46.6 bits (109), Expect(3) = 6e-44
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = -1

Query: 81  NLVRLLGCCIQGDEMLLLYEYMPKKSL 1
           NLVRLLG C++GDE +L+YEYMP +SL
Sbjct: 728 NLVRLLGYCVEGDEKMLVYEYMPNRSL 754


>ref|XP_003597066.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]
           gi|355486114|gb|AES67317.1| Cysteine-rich receptor-like
           protein kinase [Medicago truncatula]
          Length = 950

 Score =  120 bits (300), Expect(3) = 8e-42
 Identities = 56/77 (72%), Positives = 65/77 (84%)
 Frame = -3

Query: 313 NGKEELDVPFFDFRSIAAATENFSDSNKLGQGGFGPVYKGKLSGGQEIAVKRLSRTSGQG 134
           N  E ++VP++ FRSI AAT NFSDSNKLGQGG+GPVYKG+  GGQEIA+KRLS  S QG
Sbjct: 613 NDSESIEVPYYTFRSIQAATNNFSDSNKLGQGGYGPVYKGRFPGGQEIAIKRLSSVSTQG 672

Query: 133 LEEFKTEIILIAKLQHR 83
           L+EFK EI+LIAKLQHR
Sbjct: 673 LQEFKNEIVLIAKLQHR 689



 Score = 54.3 bits (129), Expect(3) = 8e-42
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
 Frame = -1

Query: 666 CEFYASVHNDLIRLP--ASDWSYV---VEIGWE*PLEPFCNLPKDCDDWPHSACMPERSG 502
           C+  +S  ND    P   ++W +    +E+ W    +P C+    C  WPHS C+   SG
Sbjct: 502 CDDSSSYQNDKPSSPFNVTNWCFKDDQIEVNWAAAPQPQCDEYFSCKSWPHSTCIANSSG 561

Query: 501 TGNRRCICISSFRWDPLAGYCTKERLEDHCQ 409
            G  RC C S + W+P +  C K+++    Q
Sbjct: 562 -GENRCHCDSKYIWNPSSLSCIKDKVSIQIQ 591



 Score = 43.5 bits (101), Expect(3) = 8e-42
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = -1

Query: 81  NLVRLLGCCIQGDEMLLLYEYMPKKSL 1
           NLVRL G CI+GDE +LLYEYM  KSL
Sbjct: 690 NLVRLRGYCIKGDEKILLYEYMSNKSL 716


>emb|CBI17984.3| unnamed protein product [Vitis vinifera]
          Length = 1004

 Score =  121 bits (303), Expect(2) = 3e-37
 Identities = 58/81 (71%), Positives = 66/81 (81%)
 Frame = -3

Query: 325 KFRGNGKEELDVPFFDFRSIAAATENFSDSNKLGQGGFGPVYKGKLSGGQEIAVKRLSRT 146
           +F  + +E +DVPFFD  SI AAT N SD+NKLGQGGFGPVYKG   GGQ+IAVKRLS  
Sbjct: 686 QFTEDDREGIDVPFFDLGSILAATNNLSDANKLGQGGFGPVYKGSFPGGQDIAVKRLSSV 745

Query: 145 SGQGLEEFKTEIILIAKLQHR 83
           SGQGLEEFK E++LIAKLQHR
Sbjct: 746 SGQGLEEFKNEVVLIAKLQHR 766



 Score = 60.8 bits (146), Expect(2) = 3e-37
 Identities = 28/81 (34%), Positives = 42/81 (51%)
 Frame = -1

Query: 681 VLNTGCEFYASVHNDLIRLPASDWSYVVEIGWE*PLEPFCNLPKDCDDWPHSACMPERSG 502
           ++ +GC    S  + L     ++W   ++I W  PLEP CN  +DC  W HS C    +G
Sbjct: 577 LVKSGCTAEKST-SSLYPFSDAEWLREIQIEWRPPLEPICNSTEDCKYWAHSNC--NTTG 633

Query: 501 TGNRRCICISSFRWDPLAGYC 439
            G +RC C  +++WDP    C
Sbjct: 634 DGQKRCHCKINYQWDPTNVSC 654


>emb|CAN70165.1| hypothetical protein VITISV_024701 [Vitis vinifera]
          Length = 1102

 Score =  122 bits (305), Expect(2) = 7e-35
 Identities = 66/126 (52%), Positives = 88/126 (69%), Gaps = 3/126 (2%)
 Frame = -3

Query: 451 SWLLYK-RTTRRSLSVIIPVTTIVGLLFLGTGKMFKENGRIADKFRGNGKEEL--DVPFF 281
           +WLL++ R   R+   +      + +L++ +G+ F ++   +    G GK+    ++P F
Sbjct: 489 TWLLWRFRAKLRAFLNLGQRKNELPILYVSSGREFSKDFSGSVDLVGEGKQGSGSELPLF 548

Query: 280 DFRSIAAATENFSDSNKLGQGGFGPVYKGKLSGGQEIAVKRLSRTSGQGLEEFKTEIILI 101
           +F+ +AAAT NFSD NKLGQGGFGPVYKG L GG+EIAVKRLSR SGQGLEEFK E+ LI
Sbjct: 549 NFKCVAAATGNFSDENKLGQGGFGPVYKGMLPGGEEIAVKRLSRRSGQGLEEFKNEMTLI 608

Query: 100 AKLQHR 83
           AKLQHR
Sbjct: 609 AKLQHR 614



 Score = 52.0 bits (123), Expect(2) = 7e-35
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = -1

Query: 81  NLVRLLGCCIQGDEMLLLYEYMPKKSL 1
           NLVRLLGCCI+G+E +LLYEYMP KSL
Sbjct: 615 NLVRLLGCCIEGEEKMLLYEYMPNKSL 641


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