BLASTX nr result

ID: Coptis24_contig00024889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024889
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243...    60   2e-07
emb|CAN78970.1| hypothetical protein VITISV_037587 [Vitis vinifera]    60   2e-07
ref|XP_004140452.1| PREDICTED: uncharacterized protein LOC101214...    59   3e-07
emb|CBI27491.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_002518800.1| conserved hypothetical protein [Ricinus comm...    59   4e-07

>ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
          Length = 2788

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
 Frame = -2

Query: 290  GKLTDVLYERIARFVNIDAPWKLFIMKLKDHLVSRLEQ-----------LSLAFQLKEAL 144
            GK T  LYE+IA    ++ PWK FI  L  +  S   Q           +SL  +L EAL
Sbjct: 2286 GKQTTELYEKIAERFAVNPPWKAFINNLSGNKGSGFPQGSVPIHESQKHVSLVSRLDEAL 2345

Query: 143  QHTFYANWREEADYMSPHCFXXXXXXXXXXXXXSQKNFYTTKSSLIE 3
            + T+ ANWR ++DY+SP  F             SQ+  +TTKSS IE
Sbjct: 2346 RDTYNANWR-QSDYISPGYFLYLVDRLLILVTSSQEYCFTTKSSYIE 2391


>emb|CAN78970.1| hypothetical protein VITISV_037587 [Vitis vinifera]
          Length = 2676

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
 Frame = -2

Query: 290  GKLTDVLYERIARFVNIDAPWKLFIMKLKDHLVSRLEQ-----------LSLAFQLKEAL 144
            GK T  LYE+IA    ++ PWK FI  L  +  S   Q           +SL  +L EAL
Sbjct: 2174 GKQTTELYEKIAERFAVNPPWKAFINNLSGNKGSGFPQGSVPIHESQKHVSLVSRLDEAL 2233

Query: 143  QHTFYANWREEADYMSPHCFXXXXXXXXXXXXXSQKNFYTTKSSLIE 3
            + T+ ANWR ++DY+SP  F             SQ+  +TTKSS IE
Sbjct: 2234 RDTYNANWR-QSDYISPGYFLYLVDRLLILVTSSQEYCFTTKSSYIE 2279


>ref|XP_004140452.1| PREDICTED: uncharacterized protein LOC101214154 [Cucumis sativus]
          Length = 917

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 14/110 (12%)
 Frame = -2

Query: 290 GKLTDVLYERIARFVNIDAPWKLFIMKLKDHLV-SRLEQLSLAF-------------QLK 153
           GKL   LY++IA   N    WK  I  LK H++ S+  + S+A              QL 
Sbjct: 183 GKLISGLYDKIAGRCNAKLHWKAVIDALKRHVIASQTSESSVARKVIEASGESELINQLH 242

Query: 152 EALQHTFYANWREEADYMSPHCFXXXXXXXXXXXXXSQKNFYTTKSSLIE 3
           EAL  TF  NW++E ++M+P+CF             SQ+ FYTT+SS IE
Sbjct: 243 EALMLTF-VNWKKEFEFMTPNCFLYIVERQFVLVSMSQRCFYTTRSSFIE 291


>emb|CBI27491.3| unnamed protein product [Vitis vinifera]
          Length = 6100

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
 Frame = -2

Query: 287  KLTDVLYERIARFVNIDAPWKLFIMKL----KDHLVSRL-----EQLSLAFQLKEALQHT 135
            KLTD      A   N D+PWK FI +L    +  L S+      E+LSL  +L+EAL+ T
Sbjct: 3115 KLTD----EFAESFNKDSPWKDFIKRLCVTKRSELSSKSSAAAEEELSLILKLREALEDT 3170

Query: 134  FYANWREEADYMSPHCFXXXXXXXXXXXXXSQKNFYTTKSSLIE 3
            + ANWR+  D++SP CF              Q   +TTK+ ++E
Sbjct: 3171 YNANWRKGMDFVSPVCFLYLVEHLLFLVSYCQGYVFTTKALVVE 3214


>ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
            gi|223542181|gb|EEF43725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2820

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
 Frame = -2

Query: 290  GKLTDVLYERIARFVNIDAPWKLFIMKL---KDHLVSRLEQLSLAFQLKEALQHTFYANW 120
            GKL + LY++IA  V  +  W   I+ L   KD  +    +LSL ++L  AL+  + ANW
Sbjct: 2320 GKLCNELYKKIADGVRWNTAWMALIVDLSRNKDINIEGANELSLKWKLHGALEDAYNANW 2379

Query: 119  REEADYMSPHCFXXXXXXXXXXXXXSQKNFYTTKSSLIE 3
            R+E D++SP CF              + +F  TKS+  E
Sbjct: 2380 RKENDFISPECFLYLVERQLMLLSYFRDDFLITKSAFTE 2418


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