BLASTX nr result

ID: Coptis24_contig00024871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024871
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142539.1| PREDICTED: exportin-4-like [Cucumis sativus]...    75   4e-12
ref|XP_002266608.2| PREDICTED: exportin-4-like [Vitis vinifera]        74   2e-11
emb|CBI22377.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002521978.1| protein with unknown function [Ricinus commu...    73   3e-11
ref|XP_002325773.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11

>ref|XP_004142539.1| PREDICTED: exportin-4-like [Cucumis sativus]
           gi|449479730|ref|XP_004155691.1| PREDICTED:
           exportin-4-like [Cucumis sativus]
          Length = 1121

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/49 (71%), Positives = 42/49 (85%)
 Frame = +2

Query: 149 DISQLQQTMQAIEYACTSIQMHVSPSESEATILSLRQSPHAYQKCRFIL 295
           +++QLQ TMQAIE AC SIQMH++PS +EATILSLRQSPH Y  C+FIL
Sbjct: 12  NLAQLQATMQAIELACGSIQMHINPSAAEATILSLRQSPHPYHTCQFIL 60


>ref|XP_002266608.2| PREDICTED: exportin-4-like [Vitis vinifera]
          Length = 1123

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/49 (71%), Positives = 42/49 (85%)
 Frame = +2

Query: 149 DISQLQQTMQAIEYACTSIQMHVSPSESEATILSLRQSPHAYQKCRFIL 295
           D++QLQ TMQAIE AC+SIQMHV+P+ +EATILSL QSP  YQ C+FIL
Sbjct: 11  DLTQLQATMQAIEIACSSIQMHVNPAAAEATILSLCQSPQPYQACQFIL 59


>emb|CBI22377.3| unnamed protein product [Vitis vinifera]
          Length = 1176

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/49 (71%), Positives = 42/49 (85%)
 Frame = +2

Query: 149 DISQLQQTMQAIEYACTSIQMHVSPSESEATILSLRQSPHAYQKCRFIL 295
           D++QLQ TMQAIE AC+SIQMHV+P+ +EATILSL QSP  YQ C+FIL
Sbjct: 20  DLTQLQATMQAIEIACSSIQMHVNPAAAEATILSLCQSPQPYQACQFIL 68


>ref|XP_002521978.1| protein with unknown function [Ricinus communis]
           gi|223538782|gb|EEF40382.1| protein with unknown
           function [Ricinus communis]
          Length = 1165

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/52 (61%), Positives = 44/52 (84%)
 Frame = +2

Query: 140 SSIDISQLQQTMQAIEYACTSIQMHVSPSESEATILSLRQSPHAYQKCRFIL 295
           ++ D++QL  TMQAIE AC+SIQMH++P+ +EATI+SL QSPH Y+ C+FIL
Sbjct: 7   NAADMAQLHSTMQAIELACSSIQMHMNPAAAEATIMSLNQSPHPYKACQFIL 58


>ref|XP_002325773.1| predicted protein [Populus trichocarpa] gi|222862648|gb|EEF00155.1|
           predicted protein [Populus trichocarpa]
          Length = 920

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/54 (61%), Positives = 42/54 (77%)
 Frame = +2

Query: 134 GASSIDISQLQQTMQAIEYACTSIQMHVSPSESEATILSLRQSPHAYQKCRFIL 295
           G    D++QLQ TM AIE AC+SIQMH++P+ +EATILSL QSP  Y+ C+FIL
Sbjct: 8   GDGIADLAQLQSTMHAIELACSSIQMHINPAAAEATILSLNQSPQPYKACQFIL 61


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