BLASTX nr result

ID: Coptis24_contig00024866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024866
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531288.1| PREDICTED: uncharacterized protein LOC100781...   131   5e-29
ref|XP_002331859.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
ref|NP_001235518.1| uncharacterized protein LOC100527398 [Glycin...   130   1e-28
gb|AFK35331.1| unknown [Lotus japonicus]                              127   7e-28
ref|XP_002316743.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27

>ref|XP_003531288.1| PREDICTED: uncharacterized protein LOC100781792 [Glycine max]
          Length = 160

 Score =  131 bits (330), Expect = 5e-29
 Identities = 63/85 (74%), Positives = 77/85 (90%)
 Frame = +2

Query: 5   VVGAASALAGINHIRLWHADSLPSAASVAIMAWSLTILAMGLAWKEIELNVRNARLKTME 184
           VVGAASA++GINHIR W ++SLPSAASVA MAW+LT+LAMG AWKEIE+++RNARLKTME
Sbjct: 76  VVGAASAISGINHIRSWTSESLPSAASVATMAWTLTLLAMGFAWKEIEIHIRNARLKTME 135

Query: 185 AFLIILTATQFLYILAIHGASSVAR 259
           AF+IIL+ATQ  YI+AIHGA++  R
Sbjct: 136 AFVIILSATQLFYIVAIHGAAAYRR 160


>ref|XP_002331859.1| predicted protein [Populus trichocarpa] gi|222875377|gb|EEF12508.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/85 (75%), Positives = 74/85 (87%)
 Frame = +2

Query: 5   VVGAASALAGINHIRLWHADSLPSAASVAIMAWSLTILAMGLAWKEIELNVRNARLKTME 184
           VVG ASA+ G+NHIR W  DSLPSAASVA ++W+LT+LAMG AWKEIEL++RNARL+TME
Sbjct: 77  VVGVASAIVGLNHIRTWTGDSLPSAASVAAVSWTLTLLAMGFAWKEIELSIRNARLRTME 136

Query: 185 AFLIILTATQFLYILAIHGASSVAR 259
           AFLIIL+ATQ LYI AIHGASS  R
Sbjct: 137 AFLIILSATQLLYIAAIHGASSFRR 161


>ref|NP_001235518.1| uncharacterized protein LOC100527398 [Glycine max]
           gi|255632258|gb|ACU16487.1| unknown [Glycine max]
          Length = 162

 Score =  130 bits (327), Expect = 1e-28
 Identities = 63/86 (73%), Positives = 76/86 (88%)
 Frame = +2

Query: 5   VVGAASALAGINHIRLWHADSLPSAASVAIMAWSLTILAMGLAWKEIELNVRNARLKTME 184
           VVGAASA++GINHI+ W A+SLPSAASVA MAW+LT+LAMG AWKEIEL +RNARLKTME
Sbjct: 76  VVGAASAISGINHIQSWTAESLPSAASVATMAWTLTLLAMGFAWKEIELRIRNARLKTME 135

Query: 185 AFLIILTATQFLYILAIHGASSVARR 262
           AF+IIL+ATQ  YI+AIH A++  R+
Sbjct: 136 AFIIILSATQLFYIVAIHSAAAYRRK 161


>gb|AFK35331.1| unknown [Lotus japonicus]
          Length = 160

 Score =  127 bits (320), Expect = 7e-28
 Identities = 63/85 (74%), Positives = 73/85 (85%)
 Frame = +2

Query: 5   VVGAASALAGINHIRLWHADSLPSAASVAIMAWSLTILAMGLAWKEIELNVRNARLKTME 184
           VVGAASA++GINHI  W A+SLPSAASVA  AW+LT+LAMG AWKE+EL +RNARLKTME
Sbjct: 76  VVGAASAISGINHICSWTAESLPSAASVATTAWTLTLLAMGFAWKEVELRIRNARLKTME 135

Query: 185 AFLIILTATQFLYILAIHGASSVAR 259
           AFLIIL+ATQ  YI AIHGA++  R
Sbjct: 136 AFLIILSATQLFYIAAIHGAAAYRR 160


>ref|XP_002316743.1| predicted protein [Populus trichocarpa] gi|222859808|gb|EEE97355.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/85 (71%), Positives = 73/85 (85%)
 Frame = +2

Query: 5   VVGAASALAGINHIRLWHADSLPSAASVAIMAWSLTILAMGLAWKEIELNVRNARLKTME 184
           VVG ASA+ G+NHIR WH+DS+PSA S A +AW+LT+LAMG A KEIEL++RNARL+TME
Sbjct: 76  VVGVASAIVGLNHIRSWHSDSMPSAVSTAAIAWALTLLAMGFASKEIELSIRNARLRTME 135

Query: 185 AFLIILTATQFLYILAIHGASSVAR 259
           AF+IIL+ATQ LYI AIHGASS  R
Sbjct: 136 AFMIILSATQLLYIAAIHGASSSRR 160


Top