BLASTX nr result

ID: Coptis24_contig00024856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024856
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]    62   2e-14
emb|CAN75909.1| hypothetical protein VITISV_023994 [Vitis vinifera]    59   6e-13
emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]    58   7e-13
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]    60   1e-12
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]    64   9e-12

>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
          Length = 1236

 Score = 61.6 bits (148), Expect(2) = 2e-14
 Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 4/46 (8%)
 Frame = -3

Query: 227 NPFFLHPSDNPGNVL----LDGDNYQTWSRAMCMALTAKNKLGFVD 102
           NP+FLH SD+PG VL    L+GDNY TW RAM ++L AK+KLGF+D
Sbjct: 16  NPYFLHHSDHPGIVLISKPLNGDNYWTWCRAMTISLNAKSKLGFID 61



 Score = 42.0 bits (97), Expect(2) = 2e-14
 Identities = 15/30 (50%), Positives = 26/30 (86%)
 Frame = -1

Query: 106 LMLSWLLNAISKDLCNSIIYSNTAAKVWSE 17
           ++LSW+LN++S+DL +S+I+S TA +VW +
Sbjct: 85  MILSWILNSLSQDLADSVIFSTTAQEVWED 114


>emb|CAN75909.1| hypothetical protein VITISV_023994 [Vitis vinifera]
          Length = 126

 Score = 58.5 bits (140), Expect(2) = 6e-13
 Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 4/48 (8%)
 Frame = -3

Query: 221 FFLHPSDNPGNVLLD----GDNYQTWSRAMCMALTAKNKLGFVDAILV 90
           ++LHPSDNPG +L+     G+NY  WSR+M +ALT KNK+ FVD  LV
Sbjct: 30  YYLHPSDNPGALLVSEIFTGENYIAWSRSMSIALTVKNKIAFVDGSLV 77



 Score = 40.4 bits (93), Expect(2) = 6e-13
 Identities = 14/30 (46%), Positives = 23/30 (76%)
 Frame = -1

Query: 106 LMLSWLLNAISKDLCNSIIYSNTAAKVWSE 17
           L+LSWL+N+I+K++C S++Y   A  +W E
Sbjct: 96  LVLSWLMNSIAKEICGSLLYFTNAFDIWEE 125


>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
          Length = 334

 Score = 58.2 bits (139), Expect(2) = 7e-13
 Identities = 28/45 (62%), Positives = 36/45 (80%), Gaps = 4/45 (8%)
 Frame = -3

Query: 227 NPFFLHPSDNPGNVL----LDGDNYQTWSRAMCMALTAKNKLGFV 105
           +PF LH SD+PG VL    L+GDNY TWSRAM ++L+AK+K+GFV
Sbjct: 19  DPFSLHHSDHPGMVLVSKVLEGDNYSTWSRAMRISLSAKDKIGFV 63



 Score = 40.4 bits (93), Expect(2) = 7e-13
 Identities = 13/30 (43%), Positives = 26/30 (86%)
 Frame = -1

Query: 106 LMLSWLLNAISKDLCNSIIYSNTAAKVWSE 17
           +++SWLLN+I  D+ +S+IY+ TA+++W++
Sbjct: 86  MVISWLLNSIHPDIASSVIYAETASEIWAD 115


>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score = 59.7 bits (143), Expect(2) = 1e-12
 Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
 Frame = -3

Query: 227 NPFFLHPSDNPGNVL----LDGDNYQTWSRAMCMALTAKNKLGFVD 102
           +P+FLH  D+PG VL    L G NY TWSRAM MALTAKNK+ F+D
Sbjct: 26  SPYFLHNLDHPGIVLVSHHLTGANYNTWSRAMVMALTAKNKISFID 71



 Score = 38.1 bits (87), Expect(2) = 1e-12
 Identities = 11/30 (36%), Positives = 25/30 (83%)
 Frame = -1

Query: 106 LMLSWLLNAISKDLCNSIIYSNTAAKVWSE 17
           +++SW+LN++ KD+ +S++Y +TA  +W++
Sbjct: 93  MVISWILNSVHKDIADSLLYFDTAVGIWND 122


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score = 63.5 bits (153), Expect(2) = 9e-12
 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
 Frame = -3

Query: 230 NNPFFLHPSDNPGNVL----LDGDNYQTWSRAMCMALTAKNKLGFVDAIL 93
           +NP+F H SD+PG VL    L+GDNY  W RAM +AL AKNKLGFV+ I+
Sbjct: 39  SNPYFTHHSDHPGLVLISKPLNGDNYSAWRRAMALALNAKNKLGFVNGII 88



 Score = 31.2 bits (69), Expect(2) = 9e-12
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = -1

Query: 97  SWLLNAISKDLCNSIIYSNTAAKVWSE 17
           SW++N ++ ++ +S+IY  TA +VW +
Sbjct: 112 SWIVNTLNPEISDSVIYYATAHEVWED 138


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