BLASTX nr result

ID: Coptis24_contig00024850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024850
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318167.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
emb|CBI20229.3| unnamed protein product [Vitis vinifera]              101   7e-20
ref|XP_002518385.1| conserved hypothetical protein [Ricinus comm...    99   3e-19
gb|EEC80310.1| hypothetical protein OsI_22348 [Oryza sativa Indi...    94   2e-17
ref|NP_001057274.1| Os06g0244100 [Oryza sativa Japonica Group] g...    92   3e-17

>ref|XP_002318167.1| predicted protein [Populus trichocarpa] gi|222858840|gb|EEE96387.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/116 (48%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
 Frame = -1

Query: 377 ISVCGSANEGVDNRC-STSTNTIPITFIHGHSRKSWNFRCRWWSKRHFSKSACVSEMEAG 201
           +SVC   NEG   +  S   N IP  F  G S   W  RCRWWS RHFSKS   SE++AG
Sbjct: 467 MSVCQHGNEGEKRQSYSVCYNGIPKMFTQGKSVGLWRSRCRWWSTRHFSKSILASEIDAG 526

Query: 200 DWELLTSKAACASHLYRPEFEYVVSVHTSLLKAQKQENIMSLELHMKNSVKVSEQL 33
           DW+LLT KAACASH+Y  +F YV   +T + K   ++  M L  HM+NS+ +  QL
Sbjct: 527 DWQLLTYKAACASHMYGQDFGYVAKAYTCIQKENNRDLSMFLRQHMQNSLGLYSQL 582


>emb|CBI20229.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
 Frame = -1

Query: 377 ISVCGSANEGVDN-RCSTSTNTIPITFIHGHSRKSWNFRCRWWSKRHFSKSACVSEMEAG 201
           +SVC   NEG    + +   N IP  FI G S K+W FRCRWW  RHF K+   SE+ AG
Sbjct: 537 MSVCLDGNEGKHKPKYAVRFNRIPNIFIEGKSGKTWRFRCRWWLTRHFGKNIINSEVAAG 596

Query: 200 DWELLTSKAACASHLYRPEFEYVVSVHTSLLKAQKQENIMSLELHMKNS 54
             ELLT KAACA H+Y   FEYVV  +  L K + ++ ++ L++HM  S
Sbjct: 597 KLELLTYKAACALHMYGQGFEYVVGAYNCLDKEKNRDMLLFLQMHMHTS 645


>ref|XP_002518385.1| conserved hypothetical protein [Ricinus communis]
           gi|223542480|gb|EEF44021.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 638

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
 Frame = -1

Query: 377 ISVCGSANEGVDNR-CSTSTNTIPITFIHGHSRKSWNFRCRWWSKRHFSKSACVSEMEAG 201
           +S C   +EG   +  S   N IP  FI G S  +W FRCRWW  RHFSK   VSE+ AG
Sbjct: 518 MSACLYGDEGKKIQGYSVRYNRIPKLFICGRSGINWRFRCRWWLTRHFSKKLLVSEIAAG 577

Query: 200 DWELLTSKAACASHLYRPEFEYVVSVHTSLLKAQKQENIMSLELHMKNSVKVS 42
           + E L  KAACA+H+Y  EF+Y V  +T L K   +   M L+LHM+N + ++
Sbjct: 578 NLEFLAYKAACAAHMYGTEFDYFVKAYTFLEKENNRSLFMFLQLHMQNHIGIN 630


>gb|EEC80310.1| hypothetical protein OsI_22348 [Oryza sativa Indica Group]
          Length = 675

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/99 (43%), Positives = 62/99 (62%)
 Frame = -1

Query: 329 TSTNTIPITFIHGHSRKSWNFRCRWWSKRHFSKSACVSEMEAGDWELLTSKAACASHLYR 150
           T+++     F   ++R++W  RC WW  RHFS+S C SE   GD +LL SKAACA HL+ 
Sbjct: 572 TASSKFSCVFFEQNTRETWKVRCTWWMNRHFSQSICTSETLTGDCKLLASKAACACHLFG 631

Query: 149 PEFEYVVSVHTSLLKAQKQENIMSLELHMKNSVKVSEQL 33
           PEFEYV +V + L   +  + I  L  +M+NSV++ + L
Sbjct: 632 PEFEYVEAVESYLSGQKADDEIAFLSRNMQNSVRLLQTL 670


>ref|NP_001057274.1| Os06g0244100 [Oryza sativa Japonica Group]
           gi|52076858|dbj|BAD45799.1| unknown protein [Oryza
           sativa Japonica Group] gi|113595314|dbj|BAF19188.1|
           Os06g0244100 [Oryza sativa Japonica Group]
           gi|215712303|dbj|BAG94430.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 675

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/99 (43%), Positives = 61/99 (61%)
 Frame = -1

Query: 329 TSTNTIPITFIHGHSRKSWNFRCRWWSKRHFSKSACVSEMEAGDWELLTSKAACASHLYR 150
           T+++     F   ++R++W  RC WW  RHFS+S C SE   GD +LL SKAACA HL+ 
Sbjct: 572 TASSKFSCVFFEQNTRETWKVRCTWWMNRHFSQSICTSETLTGDCKLLASKAACACHLFG 631

Query: 149 PEFEYVVSVHTSLLKAQKQENIMSLELHMKNSVKVSEQL 33
           PEFEYV +V   L   +  + I  L  +M+NSV++ + L
Sbjct: 632 PEFEYVEAVEGYLSGQKADDEIAFLSRNMQNSVRLLQTL 670


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