BLASTX nr result

ID: Coptis24_contig00024833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024833
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40238.3| unnamed protein product [Vitis vinifera]              296   2e-78
emb|CBI40242.3| unnamed protein product [Vitis vinifera]              294   1e-77
ref|XP_002532015.1| ATP-binding cassette transporter, putative [...   293   3e-77
ref|XP_002267345.2| PREDICTED: pleiotropic drug resistance prote...   291   7e-77
emb|CBI30263.3| unnamed protein product [Vitis vinifera]              291   7e-77

>emb|CBI40238.3| unnamed protein product [Vitis vinifera]
          Length = 1450

 Score =  296 bits (759), Expect = 2e-78
 Identities = 150/256 (58%), Positives = 187/256 (73%), Gaps = 13/256 (5%)
 Frame = -2

Query: 730  FALPIWVLKNPLSLMESGIWVILTYYTVGFAPSASRFFRQFLAFVSINQTALALFRFIAA 551
            FALPIWVL+ PLSLMESGIW+ILTYYT+GFAPSASRFFRQ LAF  ++Q AL+LFRFIAA
Sbjct: 596  FALPIWVLRIPLSLMESGIWIILTYYTIGFAPSASRFFRQLLAFFGVHQMALSLFRFIAA 655

Query: 550  LGRTLVVANXXXXXXXXXXXXXXXFMISKDDLGPWMIWGYYVSPMMYGQNAIAINEFLDE 371
            LGRT +VAN               F+++KDD+ PWMIWGYY SPM YGQNA+ INEFLD+
Sbjct: 656  LGRTQIVANTLGTFTLLLVFVLGGFIVAKDDIEPWMIWGYYASPMTYGQNALVINEFLDD 715

Query: 370  RWSTPIVDPVTREPTVGKALLRSRGLFVEEYWYWICIAALTGFSLLFNICFVMALTYLNP 191
            RWS P +D    EPTVGKALL++RG+FV+ YWYWIC+ AL GFSLLFNICF++ALTYL+P
Sbjct: 716  RWSAPNIDQRIPEPTVGKALLKARGMFVDGYWYWICVGALMGFSLLFNICFIVALTYLDP 775

Query: 190  LGGSKSAILDEDAEDTKN----SSSREDYRSV--SAMASSTFEGIDMAVRKAPD---IIV 38
            LG SKS I+DE+ E+       S+ + D  +   ++  +   EGIDM VRK  +    +V
Sbjct: 776  LGDSKSVIIDEENEEKSEKQFFSNKQHDLTTPERNSATAPMSEGIDMEVRKTRESTKSVV 835

Query: 37   EQS----IRKGMVLPF 2
            + +     ++GMVLPF
Sbjct: 836  KDANHTPTKRGMVLPF 851


>emb|CBI40242.3| unnamed protein product [Vitis vinifera]
          Length = 1388

 Score =  294 bits (753), Expect = 1e-77
 Identities = 151/257 (58%), Positives = 187/257 (72%), Gaps = 14/257 (5%)
 Frame = -2

Query: 730  FALPIWVLKNPLSLMESGIWVILTYYTVGFAPSASRFFRQFLAFVSINQTALALFRFIAA 551
            FALPIWVL+ PLSLMESGIW+ILTYYT+G+AP+ASRFFRQ LAF  ++Q AL+LFRFIAA
Sbjct: 526  FALPIWVLRIPLSLMESGIWIILTYYTIGYAPAASRFFRQLLAFFVVHQMALSLFRFIAA 585

Query: 550  LGRTLVVANXXXXXXXXXXXXXXXFMISKDDLGPWMIWGYYVSPMMYGQNAIAINEFLDE 371
            LGRTL+VAN               F++SKDD+ PWMIWGYY SPMMYGQNA+ INEFLD+
Sbjct: 586  LGRTLIVANTLATFTLLLVSVLGGFVVSKDDIKPWMIWGYYASPMMYGQNALVINEFLDD 645

Query: 370  RWSTPIVDPVTREPTVGKALLRSRGLFVEEYWYWICIAALTGFSLLFNICFVMALTYLNP 191
            RWSTP +     EPTVGKALL++RG+FV+ YWYWI + AL GFSLLFNICF+ ALTYL+P
Sbjct: 646  RWSTPNIYTRIPEPTVGKALLKARGMFVDGYWYWISVGALLGFSLLFNICFIAALTYLDP 705

Query: 190  LGGSKSAILDEDAEDTKN----SSSREDYRSVSAMASST---FEGIDMAVRKAPD---II 41
            LG SKS I+DE+ E+       S+ + D  +    ++ST    EGIDM VR   +    +
Sbjct: 706  LGDSKSVIIDEENEEKSEKQFYSNKQHDLTTPERNSASTAPMSEGIDMEVRNTRENTKAV 765

Query: 40   VEQS----IRKGMVLPF 2
            V+ +     ++GMVLPF
Sbjct: 766  VKDANHALTKRGMVLPF 782


>ref|XP_002532015.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223528327|gb|EEF30370.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1211

 Score =  293 bits (749), Expect = 3e-77
 Identities = 146/243 (60%), Positives = 177/243 (72%)
 Frame = -2

Query: 730  FALPIWVLKNPLSLMESGIWVILTYYTVGFAPSASRFFRQFLAFVSINQTALALFRFIAA 551
            FALPIWVL+ P+SL+ESGIW++LTYYT+GFAP+ASRFF+QFLAF S++Q AL+LFRFIAA
Sbjct: 405  FALPIWVLRIPISLLESGIWILLTYYTIGFAPAASRFFKQFLAFFSVHQMALSLFRFIAA 464

Query: 550  LGRTLVVANXXXXXXXXXXXXXXXFMISKDDLGPWMIWGYYVSPMMYGQNAIAINEFLDE 371
            +GRT VVAN               F++++DD+ PWMIWGYY+SPMMYGQNAI INEFLDE
Sbjct: 465  IGRTEVVANTLGTFTLLVVFVLGGFIVARDDIEPWMIWGYYISPMMYGQNAIVINEFLDE 524

Query: 370  RWSTPIVDPVTREPTVGKALLRSRGLFVEEYWYWICIAALTGFSLLFNICFVMALTYLNP 191
            RWS P  DP   +PTVGK LL+ RG+F+EEYWYWI +AAL GFSLLFNI FV ALTYL+P
Sbjct: 525  RWSAPNNDPTFSQPTVGKVLLKMRGMFLEEYWYWISVAALVGFSLLFNILFVWALTYLDP 584

Query: 190  LGGSKSAILDEDAEDTKNSSSREDYRSVSAMASSTFEGIDMAVRKAPDIIVEQSIRKGMV 11
            LG SKS IL++D    K SS+    RS    + ST          AP       +++GMV
Sbjct: 585  LGDSKSIILEDDESKKKMSSTGHKTRSTEMTSLST----------APLYEEHAPMKRGMV 634

Query: 10   LPF 2
            LPF
Sbjct: 635  LPF 637


>ref|XP_002267345.2| PREDICTED: pleiotropic drug resistance protein 2-like isoform 1
            [Vitis vinifera]
          Length = 1449

 Score =  291 bits (746), Expect = 7e-77
 Identities = 145/244 (59%), Positives = 177/244 (72%), Gaps = 1/244 (0%)
 Frame = -2

Query: 730  FALPIWVLKNPLSLMESGIWVILTYYTVGFAPSASRFFRQFLAFVSINQTALALFRFIAA 551
            FALPIWVL+ PLSLMESGIW+ILTYYT+GFAPSASRFFRQ LAF  ++Q AL+LFRFIAA
Sbjct: 618  FALPIWVLRIPLSLMESGIWIILTYYTIGFAPSASRFFRQLLAFFGVHQMALSLFRFIAA 677

Query: 550  LGRTLVVANXXXXXXXXXXXXXXXFMISKDDLGPWMIWGYYVSPMMYGQNAIAINEFLDE 371
            LGRT +VAN               F+++KDD+ PWMIWGYY SPM YGQNA+ INEFLD+
Sbjct: 678  LGRTQIVANTLGTFTLLLVFVLGGFIVAKDDIEPWMIWGYYASPMTYGQNALVINEFLDD 737

Query: 370  RWSTPIVDPVTREPTVGKALLRSRGLFVEEYWYWICIAALTGFSLLFNICFVMALTYLNP 191
            RWS P +D    EPTVGKALL++RG+FV+ YWYWIC+ AL GFSLLFNICF++ALTYL+P
Sbjct: 738  RWSAPNIDQRIPEPTVGKALLKARGMFVDGYWYWICVGALMGFSLLFNICFIVALTYLDP 797

Query: 190  LGGSKSAILDEDAED-TKNSSSREDYRSVSAMASSTFEGIDMAVRKAPDIIVEQSIRKGM 14
            LG SKS I+DE+ E+ ++   +RE  +SV   A+ T                    ++GM
Sbjct: 798  LGDSKSVIIDEENEEKSEKQKTRESTKSVVKDANHT------------------PTKRGM 839

Query: 13   VLPF 2
            VLPF
Sbjct: 840  VLPF 843


>emb|CBI30263.3| unnamed protein product [Vitis vinifera]
          Length = 1357

 Score =  291 bits (746), Expect = 7e-77
 Identities = 146/245 (59%), Positives = 181/245 (73%), Gaps = 2/245 (0%)
 Frame = -2

Query: 730  FALPIWVLKNPLSLMESGIWVILTYYTVGFAPSASRFFRQFLAFVSINQTALALFRFIAA 551
            FALPIWVL+ PLS MESGIW+ILTYYT+GFAP+ASRFFRQFLAF  I+Q AL+LFRFIAA
Sbjct: 516  FALPIWVLRIPLSFMESGIWIILTYYTIGFAPAASRFFRQFLAFFGIHQMALSLFRFIAA 575

Query: 550  LGRTLVVANXXXXXXXXXXXXXXXFMISKDDLGPWMIWGYYVSPMMYGQNAIAINEFLDE 371
            +GRT VVAN               F+ISK+D+ P+MIWGYY+SPMMYGQNAI +NEFLD+
Sbjct: 576  VGRTQVVANTLGTFTLLMVFVLGGFIISKNDIEPFMIWGYYISPMMYGQNAIVMNEFLDK 635

Query: 370  RWSTPIVDPVTREPTVGKALLRSRGLFVEEYWYWICIAALTGFSLLFNICFVMALTYLNP 191
            RW+ P  D    EPTVGK LL+SRG FV+EYW+WIC+ AL  FSLLFN+ FV ALT+LNP
Sbjct: 636  RWAAPNTDSRFNEPTVGKVLLKSRGFFVDEYWFWICVVALLAFSLLFNVLFVAALTFLNP 695

Query: 190  LGGSKSAILDEDAEDTKNSSSREDYRSVSAMASSTFEGIDMAVRKAPDII--VEQSIRKG 17
            LG +K+AIL+E+ +  KN +S   + +         EG DMAV  + +I+   E + ++G
Sbjct: 696  LGDTKNAILNEEDDKNKNKASSGQHST---------EGTDMAVINSSEIVGSAENAPKRG 746

Query: 16   MVLPF 2
            MVLPF
Sbjct: 747  MVLPF 751


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