BLASTX nr result

ID: Coptis24_contig00024830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024830
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36793.3| unnamed protein product [Vitis vinifera]              279   1e-73
ref|XP_002284576.1| PREDICTED: mannosylglycoprotein endo-beta-ma...   279   1e-73
emb|CAN82620.1| hypothetical protein VITISV_002311 [Vitis vinifera]   278   3e-73
ref|XP_002319539.1| predicted protein [Populus trichocarpa] gi|2...   275   4e-72
gb|AAO27794.1| glycosyl hydrolase [Gossypium hirsutum] gi|345104...   272   2e-71

>emb|CBI36793.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  279 bits (714), Expect = 1e-73
 Identities = 129/167 (77%), Positives = 142/167 (85%)
 Frame = -1

Query: 513  WTSRMWTKYTGVLIWKTQNPWTGLRGQFYDHLQDQTAGFYGCRCAAEPVHVQLNLSTYFI 334
            WTSRMW+KYTGVLIWKTQNPWTGLRGQFYDHL DQTAGFYGCR AAEP+HVQLNL+TYFI
Sbjct: 648  WTSRMWSKYTGVLIWKTQNPWTGLRGQFYDHLHDQTAGFYGCRSAAEPIHVQLNLATYFI 707

Query: 333  EVVNTTSDQLSGIAVEVSVWDLDGKCPYYKVTEKLSVPAKRTQTIIEMKYPKSKNXXXXX 154
            EVVNTTS+ LS I +E SVWDL+G CPYYKV +KLSVP K+T  IIEMKYPKSKN     
Sbjct: 708  EVVNTTSETLSNIGIEASVWDLEGTCPYYKVYDKLSVPPKKTVPIIEMKYPKSKNPKAVY 767

Query: 153  XXXXXXFRTSDFGILSRNFYWLHLKGGDYKLLEPYRTKKIPLKITSR 13
                  +  S++GILSRNFYWLHL GGDYKLLEPYR+KKIPLKITS+
Sbjct: 768  FLLLKLYNMSNYGILSRNFYWLHLSGGDYKLLEPYRSKKIPLKITSK 814


>ref|XP_002284576.1| PREDICTED: mannosylglycoprotein endo-beta-mannosidase-like [Vitis
            vinifera]
          Length = 973

 Score =  279 bits (714), Expect = 1e-73
 Identities = 129/167 (77%), Positives = 142/167 (85%)
 Frame = -1

Query: 513  WTSRMWTKYTGVLIWKTQNPWTGLRGQFYDHLQDQTAGFYGCRCAAEPVHVQLNLSTYFI 334
            WTSRMW+KYTGVLIWKTQNPWTGLRGQFYDHL DQTAGFYGCR AAEP+HVQLNL+TYFI
Sbjct: 648  WTSRMWSKYTGVLIWKTQNPWTGLRGQFYDHLHDQTAGFYGCRSAAEPIHVQLNLATYFI 707

Query: 333  EVVNTTSDQLSGIAVEVSVWDLDGKCPYYKVTEKLSVPAKRTQTIIEMKYPKSKNXXXXX 154
            EVVNTTS+ LS I +E SVWDL+G CPYYKV +KLSVP K+T  IIEMKYPKSKN     
Sbjct: 708  EVVNTTSETLSNIGIEASVWDLEGTCPYYKVYDKLSVPPKKTVPIIEMKYPKSKNPKAVY 767

Query: 153  XXXXXXFRTSDFGILSRNFYWLHLKGGDYKLLEPYRTKKIPLKITSR 13
                  +  S++GILSRNFYWLHL GGDYKLLEPYR+KKIPLKITS+
Sbjct: 768  FLLLKLYNMSNYGILSRNFYWLHLSGGDYKLLEPYRSKKIPLKITSK 814


>emb|CAN82620.1| hypothetical protein VITISV_002311 [Vitis vinifera]
          Length = 973

 Score =  278 bits (711), Expect = 3e-73
 Identities = 128/167 (76%), Positives = 142/167 (85%)
 Frame = -1

Query: 513  WTSRMWTKYTGVLIWKTQNPWTGLRGQFYDHLQDQTAGFYGCRCAAEPVHVQLNLSTYFI 334
            WTSRMW+KYTGVLIWKTQNPWTGLRGQFYDHL DQTAGFYGCR AAEP+HVQLNL+TYFI
Sbjct: 648  WTSRMWSKYTGVLIWKTQNPWTGLRGQFYDHLHDQTAGFYGCRSAAEPIHVQLNLATYFI 707

Query: 333  EVVNTTSDQLSGIAVEVSVWDLDGKCPYYKVTEKLSVPAKRTQTIIEMKYPKSKNXXXXX 154
            E+VNTTS+ LS I +E SVWDL+G CPYYKV +KLSVP K+T  IIEMKYPKSKN     
Sbjct: 708  ELVNTTSETLSNIGIEASVWDLEGTCPYYKVYDKLSVPPKKTVPIIEMKYPKSKNPKAVY 767

Query: 153  XXXXXXFRTSDFGILSRNFYWLHLKGGDYKLLEPYRTKKIPLKITSR 13
                  +  S++GILSRNFYWLHL GGDYKLLEPYR+KKIPLKITS+
Sbjct: 768  FLLLKLYNMSNYGILSRNFYWLHLSGGDYKLLEPYRSKKIPLKITSK 814


>ref|XP_002319539.1| predicted protein [Populus trichocarpa] gi|222857915|gb|EEE95462.1|
            predicted protein [Populus trichocarpa]
          Length = 973

 Score =  275 bits (702), Expect = 4e-72
 Identities = 125/166 (75%), Positives = 141/166 (84%)
 Frame = -1

Query: 513  WTSRMWTKYTGVLIWKTQNPWTGLRGQFYDHLQDQTAGFYGCRCAAEPVHVQLNLSTYFI 334
            WTSRMW+KYTGVLIWKTQNPWTGLRGQFYDHL DQTAGFYGCR AAEPVHVQLNL+TYFI
Sbjct: 648  WTSRMWSKYTGVLIWKTQNPWTGLRGQFYDHLHDQTAGFYGCRSAAEPVHVQLNLATYFI 707

Query: 333  EVVNTTSDQLSGIAVEVSVWDLDGKCPYYKVTEKLSVPAKRTQTIIEMKYPKSKNXXXXX 154
            EVVNT S+QLS +A+E SVWDL+G CPYY V EKLSVP+K+T  I+EMKYPKSKN     
Sbjct: 708  EVVNTLSEQLSDVAIEASVWDLEGTCPYYVVHEKLSVPSKKTVPILEMKYPKSKNPKPVY 767

Query: 153  XXXXXXFRTSDFGILSRNFYWLHLKGGDYKLLEPYRTKKIPLKITS 16
                  ++ SD+G++SRNFYWLHL GGDYKLLEPYR K++PLKI S
Sbjct: 768  FLLLKLYKMSDYGVISRNFYWLHLPGGDYKLLEPYRKKRVPLKIRS 813


>gb|AAO27794.1| glycosyl hydrolase [Gossypium hirsutum] gi|345104265|gb|AEN70954.1|
            beta-mannosidase [Gossypium hirsutum subsp. latifolium]
          Length = 976

 Score =  272 bits (695), Expect = 2e-71
 Identities = 121/168 (72%), Positives = 143/168 (85%)
 Frame = -1

Query: 513  WTSRMWTKYTGVLIWKTQNPWTGLRGQFYDHLQDQTAGFYGCRCAAEPVHVQLNLSTYFI 334
            WTSRMW+KYTGVLIWKTQNPWTGLRGQFYDHL DQTAGF+GCRCAAEP+HVQLNL+TYFI
Sbjct: 649  WTSRMWSKYTGVLIWKTQNPWTGLRGQFYDHLLDQTAGFFGCRCAAEPIHVQLNLATYFI 708

Query: 333  EVVNTTSDQLSGIAVEVSVWDLDGKCPYYKVTEKLSVPAKRTQTIIEMKYPKSKNXXXXX 154
            EVVNTT+++LS +A+E SVWDL+G CPYYKV +KLS+P K+  +I EMKYPKSKN     
Sbjct: 709  EVVNTTAEELSNVAIEASVWDLEGACPYYKVFDKLSLPPKKVVSISEMKYPKSKNPKPVF 768

Query: 153  XXXXXXFRTSDFGILSRNFYWLHLKGGDYKLLEPYRTKKIPLKITSRS 10
                  +  S++ I+SRNFYWLH+ GGDYKLLEPYR K+IPLKITS++
Sbjct: 769  FLLLKLYHVSNYSIVSRNFYWLHVSGGDYKLLEPYRNKRIPLKITSKT 816


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