BLASTX nr result
ID: Coptis24_contig00024809
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024809 (1347 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [... 378 e-102 ref|XP_002320934.1| predicted protein [Populus trichocarpa] gi|2... 377 e-102 ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricin... 376 e-102 ref|XP_002301554.1| predicted protein [Populus trichocarpa] gi|2... 374 e-101 ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [... 365 2e-98 >ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera] gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera] Length = 466 Score = 378 bits (970), Expect = e-102 Identities = 180/217 (82%), Positives = 195/217 (89%) Frame = -3 Query: 652 SKASWAVGGSSPCKLISPLEVRPHSVSITEFGAVGDGATLNTKAFQNAIFYLQSFADKGG 473 S+A WAV GS C S +RPHSV+ITEFGAVGDG TLNTKAFQNAIFYL SFADKGG Sbjct: 18 SEAPWAVWGSPHCDQTSSGVIRPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGG 77 Query: 472 AQLFVPAGRWLTGSFELISHLTLLLDKKAVILGSENSSHWPVDDPLPSYGRGRELPGGRH 293 AQLFVPAGRWLTGSF+LISHLTL LDK AVILGS NS+ WPV DPLPSYGRGRELPG RH Sbjct: 78 AQLFVPAGRWLTGSFDLISHLTLWLDKDAVILGSMNSNDWPVIDPLPSYGRGRELPGRRH 137 Query: 292 RSLIHGHNLTDVIITGDNGTIDGQGSVWWNWFRNQSLNYTRPHLVEMRNSTGVVISNLTF 113 RSLI+G NLTDVI+TGDNGTIDGQGS+WWNWF+ ++LNYTRPHLVE NSTGVVISN+TF Sbjct: 138 RSLIYGCNLTDVIVTGDNGTIDGQGSIWWNWFQKKTLNYTRPHLVEFINSTGVVISNVTF 197 Query: 112 LNSPFWTIHPVYCSRVLVQNVTILAPLDSPNTDGIDP 2 LNSPFWTIHPVYCS+V++QNVTILAPLDSPNTDGIDP Sbjct: 198 LNSPFWTIHPVYCSQVIIQNVTILAPLDSPNTDGIDP 234 >ref|XP_002320934.1| predicted protein [Populus trichocarpa] gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa] Length = 427 Score = 377 bits (968), Expect = e-102 Identities = 176/215 (81%), Positives = 196/215 (91%) Frame = -3 Query: 646 ASWAVGGSSPCKLISPLEVRPHSVSITEFGAVGDGATLNTKAFQNAIFYLQSFADKGGAQ 467 A WA+ G+S C+ +P +RPHSV+ITEFGAVGDG TLNTKAFQNAIFYL SFADKGGA+ Sbjct: 13 APWAIRGNSHCQWGNPAVIRPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAK 72 Query: 466 LFVPAGRWLTGSFELISHLTLLLDKKAVILGSENSSHWPVDDPLPSYGRGRELPGGRHRS 287 LFVPAG+WLTGSF+LISHLTL LDK A+ILGS NS WPV D LPSYGRGRELPG RH+S Sbjct: 73 LFVPAGQWLTGSFDLISHLTLWLDKDAIILGSTNSDDWPVIDSLPSYGRGRELPGRRHKS 132 Query: 286 LIHGHNLTDVIITGDNGTIDGQGSVWWNWFRNQSLNYTRPHLVEMRNSTGVVISNLTFLN 107 LI+G NLTDVIITGDNGTIDGQGS+WWNWFRN++L+YTRPHLVE+ N+TGVVISNLTFLN Sbjct: 133 LIYGRNLTDVIITGDNGTIDGQGSIWWNWFRNETLDYTRPHLVELMNTTGVVISNLTFLN 192 Query: 106 SPFWTIHPVYCSRVLVQNVTILAPLDSPNTDGIDP 2 SPFWTIHPVYCS+V+VQNVTILAPLDSPNTDGIDP Sbjct: 193 SPFWTIHPVYCSQVIVQNVTILAPLDSPNTDGIDP 227 >ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis] gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis] Length = 476 Score = 376 bits (966), Expect = e-102 Identities = 174/217 (80%), Positives = 194/217 (89%) Frame = -3 Query: 652 SKASWAVGGSSPCKLISPLEVRPHSVSITEFGAVGDGATLNTKAFQNAIFYLQSFADKGG 473 S +W + GSS CK + ++RPHSV+ITEFGAVGDG TLNTKAFQNAIFYL SF+DKGG Sbjct: 28 SDVTWHIRGSSHCKRANSADIRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFSDKGG 87 Query: 472 AQLFVPAGRWLTGSFELISHLTLLLDKKAVILGSENSSHWPVDDPLPSYGRGRELPGGRH 293 A+LFVPAGRWLTGSF+LISHLTL LDK AVILGS NS WPV D LPSYGRGRELPGGRH Sbjct: 88 AKLFVPAGRWLTGSFDLISHLTLWLDKNAVILGSTNSDDWPVVDALPSYGRGRELPGGRH 147 Query: 292 RSLIHGHNLTDVIITGDNGTIDGQGSVWWNWFRNQSLNYTRPHLVEMRNSTGVVISNLTF 113 RSLI+G NLTDV+ITGDNGTIDGQGS+WW WF+ +SLNYTRPHLVE+ NS+G+VISNLTF Sbjct: 148 RSLIYGRNLTDVVITGDNGTIDGQGSIWWTWFKTESLNYTRPHLVELMNSSGIVISNLTF 207 Query: 112 LNSPFWTIHPVYCSRVLVQNVTILAPLDSPNTDGIDP 2 +NSPFWTIHPVYCS+V+VQNVTI APLDSPNTDGIDP Sbjct: 208 INSPFWTIHPVYCSKVIVQNVTIRAPLDSPNTDGIDP 244 >ref|XP_002301554.1| predicted protein [Populus trichocarpa] gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa] Length = 458 Score = 374 bits (959), Expect = e-101 Identities = 180/234 (76%), Positives = 197/234 (84%) Frame = -3 Query: 703 MKRSVAXXXXXXXLTFISKASWAVGGSSPCKLISPLEVRPHSVSITEFGAVGDGATLNTK 524 M+RS L A WA+ S C+ + +RPHSV+ITEFGAVGDG TLNTK Sbjct: 1 MRRSFTLVNVLLLLALFGDAPWAIKCSLLCEQGNLAVIRPHSVTITEFGAVGDGVTLNTK 60 Query: 523 AFQNAIFYLQSFADKGGAQLFVPAGRWLTGSFELISHLTLLLDKKAVILGSENSSHWPVD 344 AFQNAIFYL SFADKGGA+LFVP GRWLTGSF+LISHLTL LDK AVILGS NS WPV Sbjct: 61 AFQNAIFYLNSFADKGGAKLFVPTGRWLTGSFDLISHLTLWLDKDAVILGSTNSDDWPVI 120 Query: 343 DPLPSYGRGRELPGGRHRSLIHGHNLTDVIITGDNGTIDGQGSVWWNWFRNQSLNYTRPH 164 DPLPSYGRGRELPG RH+SLI+G NLTDVIITGDNGTIDGQGS+WW+WFRNQ+LNYTRPH Sbjct: 121 DPLPSYGRGRELPGRRHKSLIYGRNLTDVIITGDNGTIDGQGSIWWDWFRNQTLNYTRPH 180 Query: 163 LVEMRNSTGVVISNLTFLNSPFWTIHPVYCSRVLVQNVTILAPLDSPNTDGIDP 2 LVE N+TGVVISNLTF+NSPFWTIHPVYCS+V+VQNVTILAPLDSPNTDGIDP Sbjct: 181 LVEFMNTTGVVISNLTFINSPFWTIHPVYCSQVIVQNVTILAPLDSPNTDGIDP 234 >ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max] Length = 472 Score = 365 bits (936), Expect = 2e-98 Identities = 175/217 (80%), Positives = 192/217 (88%) Frame = -3 Query: 652 SKASWAVGGSSPCKLISPLEVRPHSVSITEFGAVGDGATLNTKAFQNAIFYLQSFADKGG 473 S ++W V SS C I+ EVRPHSVSITEFGAVGDG TLNTKAFQNAIFYL SFADKGG Sbjct: 26 SCSTWTVWSSSCCNQINLNEVRPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFADKGG 85 Query: 472 AQLFVPAGRWLTGSFELISHLTLLLDKKAVILGSENSSHWPVDDPLPSYGRGRELPGGRH 293 A+LFVPAGRWLTGSF+LISHLTL LD AVILGS NS WPV DPLPSYGRGRELPGGRH Sbjct: 86 AKLFVPAGRWLTGSFDLISHLTLWLDNDAVILGSTNSDDWPVVDPLPSYGRGRELPGGRH 145 Query: 292 RSLIHGHNLTDVIITGDNGTIDGQGSVWWNWFRNQSLNYTRPHLVEMRNSTGVVISNLTF 113 RSLI+G NLTDV+ITG+NGTIDGQGS+WWN F N++LNYTRPHLVE+ NSTGV+ISN+TF Sbjct: 146 RSLIYGCNLTDVVITGNNGTIDGQGSIWWNNFWNKTLNYTRPHLVELMNSTGVLISNVTF 205 Query: 112 LNSPFWTIHPVYCSRVLVQNVTILAPLDSPNTDGIDP 2 LNSPFWTIHPVYCS V +QNVTI+APL SPNTDGI+P Sbjct: 206 LNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINP 242