BLASTX nr result

ID: Coptis24_contig00024808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024808
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524662.1| heat shock protein binding protein, putative...   102   8e-26
ref|XP_003634709.1| PREDICTED: uncharacterized protein LOC100854...   108   5e-25
ref|XP_003553824.1| PREDICTED: uncharacterized protein LOC100776...   100   2e-22
ref|XP_002298530.1| predicted protein [Populus trichocarpa] gi|2...   102   5e-20
ref|XP_003634711.1| PREDICTED: uncharacterized protein LOC100855...    96   2e-19

>ref|XP_002524662.1| heat shock protein binding protein, putative [Ricinus communis]
           gi|223536023|gb|EEF37681.1| heat shock protein binding
           protein, putative [Ricinus communis]
          Length = 301

 Score =  102 bits (253), Expect(2) = 8e-26
 Identities = 47/64 (73%), Positives = 56/64 (87%)
 Frame = -1

Query: 215 LLGVSFDSNPKAIKEAYRKLQKKHHPDIAGQKGHEYTLMLNEAYQVLMKDSLRKDYDASI 36
           LLGVS DS+ K IKEAYRKLQKK+HPDIAGQ+GHEYT MLNEAY++LM++ LR++YD SI
Sbjct: 62  LLGVSVDSDVKGIKEAYRKLQKKYHPDIAGQQGHEYTSMLNEAYKILMREDLRREYDISI 121

Query: 35  GNVG 24
           G  G
Sbjct: 122 GQYG 125



 Score = 40.8 bits (94), Expect(2) = 8e-26
 Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 459 ISATITSPAQPFLKPKSTLAQQYIYPKKASFRWRHNSVVIRCC-RSTANGVKTENYYELL 283
           +S +I S   PF  PK +       P     RWR     IRCC R TA+    +NYYELL
Sbjct: 4   MSLSIVSVYYPFSLPKLSQFHGCFNPNNTCSRWRQKCPRIRCCIRQTASTRTDKNYYELL 63


>ref|XP_003634709.1| PREDICTED: uncharacterized protein LOC100854700 [Vitis vinifera]
           gi|297735977|emb|CBI23951.3| unnamed protein product
           [Vitis vinifera]
          Length = 302

 Score =  108 bits (269), Expect(2) = 5e-25
 Identities = 51/71 (71%), Positives = 61/71 (85%)
 Frame = -1

Query: 215 LLGVSFDSNPKAIKEAYRKLQKKHHPDIAGQKGHEYTLMLNEAYQVLMKDSLRKDYDASI 36
           LLGVS DSNP+ IKEAYRKLQKK+HPD+AGQKGHEY+LMLNEAY+VL ++ LR++YDASI
Sbjct: 56  LLGVSVDSNPQEIKEAYRKLQKKYHPDVAGQKGHEYSLMLNEAYRVLAREDLRREYDASI 115

Query: 35  GNVGGQFGRDF 3
           G +   FG  F
Sbjct: 116 GKMRVGFGGIF 126



 Score = 32.0 bits (71), Expect(2) = 5e-25
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -3

Query: 402 AQQYIYPKKASFRWRHNSVVIRC-CRSTANGVKT-ENYYELL 283
           + Q+  P   + RWRH    +RC  RS     +T ++YYELL
Sbjct: 16  SSQFDIPNNLTTRWRHKFTSVRCSSRSDGQSARTRKSYYELL 57


>ref|XP_003553824.1| PREDICTED: uncharacterized protein LOC100776887 [Glycine max]
          Length = 276

 Score =  100 bits (249), Expect(2) = 2e-22
 Identities = 49/68 (72%), Positives = 56/68 (82%)
 Frame = -1

Query: 215 LLGVSFDSNPKAIKEAYRKLQKKHHPDIAGQKGHEYTLMLNEAYQVLMKDSLRKDYDASI 36
           LLGVS DSN   IKEAYRKLQKK+HPDI GQKGHEYTLMLN+AY+VLM + LR+ YD SI
Sbjct: 31  LLGVSVDSNAHEIKEAYRKLQKKYHPDIFGQKGHEYTLMLNKAYEVLMTEDLRRKYDESI 90

Query: 35  GNVGGQFG 12
           G +  +FG
Sbjct: 91  GPMRLRFG 98



 Score = 31.2 bits (69), Expect(2) = 2e-22
 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = -3

Query: 366 RWRHNSVVIRCC-RSTANGVKTE-NYYELL 283
           RWR N  VIRCC R T     T+ NYY+LL
Sbjct: 3   RWRQNLAVIRCCNRGTWEIPMTQNNYYDLL 32


>ref|XP_002298530.1| predicted protein [Populus trichocarpa] gi|222845788|gb|EEE83335.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score =  102 bits (255), Expect = 5e-20
 Identities = 50/70 (71%), Positives = 57/70 (81%)
 Frame = -1

Query: 215 LLGVSFDSNPKAIKEAYRKLQKKHHPDIAGQKGHEYTLMLNEAYQVLMKDSLRKDYDASI 36
           LLGVS DS+ + IKEAYRKLQKK+HPDIAG KGHEY LMLNEAY VLM D LR  YDASI
Sbjct: 58  LLGVSVDSSTQKIKEAYRKLQKKYHPDIAGHKGHEYALMLNEAYNVLMTDDLRTKYDASI 117

Query: 35  GNVGGQFGRD 6
           G++  Q G++
Sbjct: 118 GHMTVQIGKN 127


>ref|XP_003634711.1| PREDICTED: uncharacterized protein LOC100855066 [Vitis vinifera]
           gi|297735976|emb|CBI23950.3| unnamed protein product
           [Vitis vinifera]
          Length = 284

 Score = 96.3 bits (238), Expect(2) = 2e-19
 Identities = 47/71 (66%), Positives = 56/71 (78%)
 Frame = -1

Query: 215 LLGVSFDSNPKAIKEAYRKLQKKHHPDIAGQKGHEYTLMLNEAYQVLMKDSLRKDYDASI 36
           LLG S DSN + IKEAYRKLQKK+HPD+AG+KGHEY+LMLNEAY VL  + LR++YDASI
Sbjct: 57  LLGDSVDSNTQQIKEAYRKLQKKYHPDVAGEKGHEYSLMLNEAYGVLAWEDLRREYDASI 116

Query: 35  GNVGGQFGRDF 3
           G +   F   F
Sbjct: 117 GQMRVGFWGSF 127



 Score = 25.4 bits (54), Expect(2) = 2e-19
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -3

Query: 408 TLAQQYIYPKKASFRWRHNSVVIRCCRSTA---NGVKTENYYELL 283
           T + Q+  P     RW+     +RC  STA   +    ++Y+ELL
Sbjct: 14  TNSSQFDNPNNLITRWKPEFTSVRCSTSTAGRRSARTRKSYHELL 58


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