BLASTX nr result

ID: Coptis24_contig00024807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024807
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280934.2| PREDICTED: uncharacterized protein LOC100242...   124   1e-26
ref|XP_003533390.1| PREDICTED: uncharacterized protein LOC100777...   101   7e-20
ref|XP_003529993.1| PREDICTED: uncharacterized protein LOC100818...   101   7e-20
ref|XP_004151568.1| PREDICTED: uncharacterized protein LOC101213...    99   4e-19
ref|XP_003620595.1| tRNA(Ile)-lysidine synthase [Medicago trunca...    97   2e-18

>ref|XP_002280934.2| PREDICTED: uncharacterized protein LOC100242283 [Vitis vinifera]
           gi|297738821|emb|CBI28066.3| unnamed protein product
           [Vitis vinifera]
          Length = 707

 Score =  124 bits (310), Expect = 1e-26
 Identities = 66/105 (62%), Positives = 73/105 (69%), Gaps = 3/105 (2%)
 Frame = -3

Query: 507 HMTDTDWRYLANLLRGQISEESPEQNT---PEMCNRHEKTFSCSDFVRLSTQRALRALKL 337
           HM D DW YLA L + Q  E   ++       M    EKT  CSDF RLS +RAL +LK 
Sbjct: 595 HMVDADWLYLAKLSKHQNLENHEKERVILASAMEQISEKTILCSDFARLSAERALHSLKS 654

Query: 336 IPVAARRSLPVLVSSQGLLLSIPSIGFEHCPYLMASAVFKPRVPL 202
           IPVAARRSLPVL++S GLLLSIPSI F HCPYLM SAVFKPRVPL
Sbjct: 655 IPVAARRSLPVLINSHGLLLSIPSICFRHCPYLMVSAVFKPRVPL 699


>ref|XP_003533390.1| PREDICTED: uncharacterized protein LOC100777173 [Glycine max]
          Length = 705

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/105 (46%), Positives = 69/105 (65%), Gaps = 3/105 (2%)
 Frame = -3

Query: 507 HMTDTDWRYLANLLRGQISEESPEQNTPEMCNRH---EKTFSCSDFVRLSTQRALRALKL 337
           HM ++DW YLA L +  +S+  P+     +       ++T  C  +  +S ++ALR LK 
Sbjct: 593 HMIESDWLYLAELSKYPLSKNFPQYEVESVNGTERIMDRTSLCLHYASVSAKQALRLLKS 652

Query: 336 IPVAARRSLPVLVSSQGLLLSIPSIGFEHCPYLMASAVFKPRVPL 202
           IPVAARRSLPVL++ QG LLSIPS+ F+HCP+LM    FKP++PL
Sbjct: 653 IPVAARRSLPVLINQQGQLLSIPSVNFKHCPFLMVHMEFKPKIPL 697


>ref|XP_003529993.1| PREDICTED: uncharacterized protein LOC100818654 [Glycine max]
          Length = 710

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/105 (46%), Positives = 69/105 (65%), Gaps = 3/105 (2%)
 Frame = -3

Query: 507 HMTDTDWRYLANLLRGQISEESPEQNTPEMCNRHE---KTFSCSDFVRLSTQRALRALKL 337
           HM ++DW YLA L +  +S+  P+     +    +   +T  C  +  +S ++ALR LK 
Sbjct: 593 HMIESDWLYLAELSKYPLSKNFPQYEVKSVNGTKQIMDRTSPCLHYASVSAKQALRLLKS 652

Query: 336 IPVAARRSLPVLVSSQGLLLSIPSIGFEHCPYLMASAVFKPRVPL 202
           IPVAARRSLPVL++ QG LLSIPS+ F+HCP+LM    FKP++PL
Sbjct: 653 IPVAARRSLPVLINQQGQLLSIPSVNFKHCPFLMVHMEFKPKIPL 697


>ref|XP_004151568.1| PREDICTED: uncharacterized protein LOC101213951 [Cucumis sativus]
           gi|449531852|ref|XP_004172899.1| PREDICTED:
           uncharacterized LOC101213951 [Cucumis sativus]
          Length = 435

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 54/105 (51%), Positives = 69/105 (65%), Gaps = 4/105 (3%)
 Frame = -3

Query: 507 HMTDTDWRYLANLLRGQISEESPEQNTPEMCNRH----EKTFSCSDFVRLSTQRALRALK 340
           HMT++DW YL+ L +   + ++ +     + +      E T  C +  R S + AL  LK
Sbjct: 322 HMTESDWLYLSKLSKCSCTVKNCQNPRDTLASLEGQTMESTNRCLNSARSSAREALVLLK 381

Query: 339 LIPVAARRSLPVLVSSQGLLLSIPSIGFEHCPYLMASAVFKPRVP 205
           LIPVAARRSLPVLV+ QGLLLSIPSI F HCP+L+ASA FKP VP
Sbjct: 382 LIPVAARRSLPVLVNHQGLLLSIPSIRFSHCPWLVASAEFKPMVP 426


>ref|XP_003620595.1| tRNA(Ile)-lysidine synthase [Medicago truncatula]
           gi|357500787|ref|XP_003620682.1| tRNA(Ile)-lysidine
           synthase [Medicago truncatula]
           gi|355495610|gb|AES76813.1| tRNA(Ile)-lysidine synthase
           [Medicago truncatula] gi|355495697|gb|AES76900.1|
           tRNA(Ile)-lysidine synthase [Medicago truncatula]
          Length = 842

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/102 (50%), Positives = 65/102 (63%)
 Frame = -3

Query: 507 HMTDTDWRYLANLLRGQISEESPEQNTPEMCNRHEKTFSCSDFVRLSTQRALRALKLIPV 328
           HM ++DW YLA L R    E S   NT  M    EKT S   +  +S ++AL  LK IPV
Sbjct: 619 HMIESDWLYLAELSRYSPLENSANGNTKMM----EKTASYLHYASVSAKKALVLLKSIPV 674

Query: 327 AARRSLPVLVSSQGLLLSIPSIGFEHCPYLMASAVFKPRVPL 202
           AARRSLPVL++ QG L+ IPS+ F+HCP LM    +KP++PL
Sbjct: 675 AARRSLPVLINQQGKLICIPSVNFKHCPCLMVHVEYKPKIPL 716


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