BLASTX nr result

ID: Coptis24_contig00024803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024803
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
 Frame = -2

Query: 493 LGVLDKCLSLVDTSSGQFVDIWVVKDYDGEMSWNKQFSLGQNLICDSA--IGLVRPIQVL 320
           LGVL  CL   D   G   DIWV+K Y  + SW K+F L +N   D      L RPI +L
Sbjct: 281 LGVLGGCLYFFDYPLGDSFDIWVMKQYGVQESWTKEFIL-KNPSTDIIWYWDLYRPISLL 339

Query: 319 KSGEILLFCGLTDLVAYNTESNQRRFLKL 233
            +GEIL+      +V+YN E    RFLK+
Sbjct: 340 SNGEILMSHKSKAMVSYNPEDRSFRFLKI 368


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