BLASTX nr result

ID: Coptis24_contig00024799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024799
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI18282.1| hypothetical protein [uncultured Chromatiales bac...    92   6e-17
ref|ZP_04532939.1| leucine rich protein [Escherichia sp. 3_2_53F...    77   1e-12
ref|ZP_21730108.1| hypothetical protein HALTITAN_3298 [Halomonas...    76   3e-12
emb|CCG94050.1| hypothetical protein MARHY0556 [Marinobacter hyd...    75   4e-12
gb|ADI19064.1| hypothetical protein [uncultured delta proteobact...    46   1e-10

>gb|ADI18282.1| hypothetical protein [uncultured Chromatiales bacterium
           HF0200_41F04]
          Length = 89

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/71 (66%), Positives = 50/71 (70%)
 Frame = -2

Query: 341 PPVSVWGTVPGYLKLRSFSWKHGINHFVI*KITRHQLSALESRIYLRFQPTTLNLDNQRQ 162
           PPVSVWGTV  YLKLR FSWK GINHF   K  RH++S L SRI+LR  PT LN DN   
Sbjct: 19  PPVSVWGTVTFYLKLRGFSWKQGINHFGPKKGPRHRISGLLSRIFLRELPTCLNRDNHHP 78

Query: 161 AGLAFSVPPSQ 129
           A L FSV PSQ
Sbjct: 79  ADLTFSVTPSQ 89


>ref|ZP_04532939.1| leucine rich protein [Escherichia sp. 3_2_53FAA]
           gi|226903372|gb|EEH89631.1| leucine rich protein
           [Escherichia sp. 3_2_53FAA]
          Length = 56

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/56 (67%), Positives = 41/56 (73%)
 Frame = -1

Query: 210 LPKIPAYHLKLGQPTPSWPSLLRPSIAITRSTGILTCFPSTTLFSLALGTD*PCVD 43
           +P  PAY LK GQP+P   SLLRP  A+T STGILTCFPSTT F LALG D PC D
Sbjct: 1   MPGKPAYTLKPGQPSPGQHSLLRPPFAVTPSTGILTCFPSTTPFGLALGVDSPCPD 56


>ref|ZP_21730108.1| hypothetical protein HALTITAN_3298 [Halomonas titanicae BH1]
           gi|445563934|gb|ELY20073.1| hypothetical protein
           HALTITAN_3298 [Halomonas titanicae BH1]
          Length = 75

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/76 (55%), Positives = 52/76 (68%)
 Frame = -2

Query: 335 VSVWGTVPGYLKLRSFSWKHGINHFVI*KITRHQLSALESRIYLRFQPTTLNLDNQRQAG 156
           +SVWGTV   LKLR FSWK GI+ F+   ++  ++SAL  RIYLR +PT  + D QR A 
Sbjct: 1   MSVWGTVAHDLKLRGFSWKRGISDFLT-VVSSSRVSALRPRIYLRSRPTHFHQDYQRLAH 59

Query: 155 LAFSVPPSQ*PEVQEY 108
           LAF VPPSQ   V+EY
Sbjct: 60  LAFFVPPSQPCPVREY 75


>emb|CCG94050.1| hypothetical protein MARHY0556 [Marinobacter hydrocarbonoclasticus
           ATCC 49840]
          Length = 60

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/58 (67%), Positives = 41/58 (70%)
 Frame = -1

Query: 216 PDLPKIPAYHLKLGQPTPSWPSLLRPSIAITRSTGILTCFPSTTLFSLALGTD*PCVD 43
           PDLPK   Y LK GQP+P  PSLLR SIA  + TGILT FPSTT F LALG D PC D
Sbjct: 3   PDLPKSTPYMLKPGQPSPGSPSLLRLSIAAIQGTGILTRFPSTTPFGLALGADSPCAD 60


>gb|ADI19064.1| hypothetical protein [uncultured delta proteobacterium
           HF0070_15B21] gi|297183042|gb|ADI19188.1| hypothetical
           protein [uncultured delta proteobacterium HF0130_05G09]
          Length = 166

 Score = 46.2 bits (108), Expect(3) = 1e-10
 Identities = 22/37 (59%), Positives = 25/37 (67%)
 Frame = -1

Query: 243 SSSALGLRIPDLPKIPAYHLKLGQPTPSWPSLLRPSI 133
           SSSAL +  PDLP+   Y LK G P+P  P LLRPSI
Sbjct: 20  SSSALAVEAPDLPRASGYRLKPGHPSPGRPILLRPSI 56



 Score = 37.4 bits (85), Expect(3) = 1e-10
 Identities = 19/44 (43%), Positives = 25/44 (56%)
 Frame = -3

Query: 145 PSLHRNNQKYRNINLFSIDYAFQPXXXXXXXXXXXXXXRKPWSF 14
           PS+ R+ +KYRN+N FS DYAF+P              R PW+F
Sbjct: 54  PSITRH-RKYRNMNRFSFDYAFRPRLRCRLTLGGLTWPRNPWTF 96



 Score = 26.9 bits (58), Expect(3) = 1e-10
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -2

Query: 299 LRSFSWKHGINHFV 258
           LRSFSW+ GIN FV
Sbjct: 2   LRSFSWQCGINRFV 15


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