BLASTX nr result
ID: Coptis24_contig00024792
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024792 (253 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515281.1| conserved hypothetical protein [Ricinus comm... 57 2e-06 ref|XP_002320973.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 >ref|XP_002515281.1| conserved hypothetical protein [Ricinus communis] gi|223545761|gb|EEF47265.1| conserved hypothetical protein [Ricinus communis] Length = 327 Score = 56.6 bits (135), Expect = 2e-06 Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 6/76 (7%) Frame = -1 Query: 253 LALADGIELLSPNTIVVAGISSGRIV------ERF*MIGKQLMLSPSIRGHA*CINASAA 92 L+ DG+ELLSP IVVAG SGR+V E ++GK P+ R A+AA Sbjct: 245 LSFGDGLELLSPTKIVVAGNPSGRLVESSDGWETATLVGK--FKGPAHR------LATAA 296 Query: 91 TVKDEKVYLNHLFGVG 44 TVKD KVYLNH+ G+G Sbjct: 297 TVKDGKVYLNHMIGIG 312 >ref|XP_002320973.1| predicted protein [Populus trichocarpa] gi|222861746|gb|EEE99288.1| predicted protein [Populus trichocarpa] Length = 328 Score = 56.2 bits (134), Expect = 3e-06 Identities = 36/74 (48%), Positives = 46/74 (62%) Frame = -1 Query: 253 LALADGIELLSPNTIVVAGISSGRIVERF*MIGKQLMLSPSIRGHA*CINASAATVKDEK 74 LA DG+ELLSP +VVAG SGR+VE + + +G A + A+AATVKD + Sbjct: 246 LAFGDGLELLSPTKLVVAGNPSGRLVESSDR-WETASVVAKFKGPAHRL-ATAATVKDGR 303 Query: 73 VYLNHLFGVGLRAR 32 VYLNHL G+G R Sbjct: 304 VYLNHLLGMGYPKR 317