BLASTX nr result

ID: Coptis24_contig00024791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024791
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263597.2| PREDICTED: AP2-like ethylene-responsive tran...    59   4e-07
emb|CAN71938.1| hypothetical protein VITISV_038909 [Vitis vinifera]    59   4e-07
ref|XP_002307311.1| AP2 domain-containing transcription factor [...    55   8e-06

>ref|XP_002263597.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           ANT-like [Vitis vinifera]
          Length = 653

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/62 (51%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = -3

Query: 351 LSNSREGTPDKNGSSMLFAKPPSTSKFM--XXXXXXXXXXXPQLKSPITMTHFPVFAAWT 178
           LS+SREG+PDK    MLFA PPS  KF               QL+  I M H PVFAAWT
Sbjct: 592 LSSSREGSPDKTSLPMLFAIPPSAPKFFATPANTVNSWIPSAQLRPAIPMPHMPVFAAWT 651

Query: 177 DG 172
           DG
Sbjct: 652 DG 653


>emb|CAN71938.1| hypothetical protein VITISV_038909 [Vitis vinifera]
          Length = 908

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/62 (51%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = -3

Query: 351  LSNSREGTPDKNGSSMLFAKPPSTSKFM--XXXXXXXXXXXPQLKSPITMTHFPVFAAWT 178
            LS+SREG+PDK    MLFA PPS  KF               QL+  I M H PVFAAWT
Sbjct: 847  LSSSREGSPDKTSLPMLFAIPPSAPKFFATPANTVNSWIPSAQLRPAIPMPHMPVFAAWT 906

Query: 177  DG 172
            DG
Sbjct: 907  DG 908


>ref|XP_002307311.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222856760|gb|EEE94307.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 639

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
 Frame = -3

Query: 351 LSNSREGTPDKNGSSMLFAKPPSTSKFM--XXXXXXXXXXXPQLK-SPITMTHFPVFAAW 181
           LS+SRE +PDK G+ +LFAKPP  SKF+              QL+ + I+M H PVFAAW
Sbjct: 577 LSSSREASPDKTGTPVLFAKPPRASKFIGPTTSVTPWIQAAAQLRPAGISMAHLPVFAAW 636

Query: 180 TD 175
            D
Sbjct: 637 ND 638