BLASTX nr result
ID: Coptis24_contig00024791
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024791 (353 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263597.2| PREDICTED: AP2-like ethylene-responsive tran... 59 4e-07 emb|CAN71938.1| hypothetical protein VITISV_038909 [Vitis vinifera] 59 4e-07 ref|XP_002307311.1| AP2 domain-containing transcription factor [... 55 8e-06 >ref|XP_002263597.2| PREDICTED: AP2-like ethylene-responsive transcription factor ANT-like [Vitis vinifera] Length = 653 Score = 58.9 bits (141), Expect = 4e-07 Identities = 32/62 (51%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = -3 Query: 351 LSNSREGTPDKNGSSMLFAKPPSTSKFM--XXXXXXXXXXXPQLKSPITMTHFPVFAAWT 178 LS+SREG+PDK MLFA PPS KF QL+ I M H PVFAAWT Sbjct: 592 LSSSREGSPDKTSLPMLFAIPPSAPKFFATPANTVNSWIPSAQLRPAIPMPHMPVFAAWT 651 Query: 177 DG 172 DG Sbjct: 652 DG 653 >emb|CAN71938.1| hypothetical protein VITISV_038909 [Vitis vinifera] Length = 908 Score = 58.9 bits (141), Expect = 4e-07 Identities = 32/62 (51%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = -3 Query: 351 LSNSREGTPDKNGSSMLFAKPPSTSKFM--XXXXXXXXXXXPQLKSPITMTHFPVFAAWT 178 LS+SREG+PDK MLFA PPS KF QL+ I M H PVFAAWT Sbjct: 847 LSSSREGSPDKTSLPMLFAIPPSAPKFFATPANTVNSWIPSAQLRPAIPMPHMPVFAAWT 906 Query: 177 DG 172 DG Sbjct: 907 DG 908 >ref|XP_002307311.1| AP2 domain-containing transcription factor [Populus trichocarpa] gi|222856760|gb|EEE94307.1| AP2 domain-containing transcription factor [Populus trichocarpa] Length = 639 Score = 54.7 bits (130), Expect = 8e-06 Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 3/62 (4%) Frame = -3 Query: 351 LSNSREGTPDKNGSSMLFAKPPSTSKFM--XXXXXXXXXXXPQLK-SPITMTHFPVFAAW 181 LS+SRE +PDK G+ +LFAKPP SKF+ QL+ + I+M H PVFAAW Sbjct: 577 LSSSREASPDKTGTPVLFAKPPRASKFIGPTTSVTPWIQAAAQLRPAGISMAHLPVFAAW 636 Query: 180 TD 175 D Sbjct: 637 ND 638