BLASTX nr result

ID: Coptis24_contig00024790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024790
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317781.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
emb|CBI23014.3| unnamed protein product [Vitis vinifera]               58   9e-07
ref|XP_002272529.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis v...    58   9e-07
ref|XP_002516665.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>ref|XP_002317781.1| predicted protein [Populus trichocarpa] gi|222858454|gb|EEE96001.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/95 (42%), Positives = 48/95 (50%)
 Frame = +3

Query: 228 NAEIWQHDHIPEVMSFEHFPTTETSPDTDVRRNEEENGDQSPTPEEEDRNHXXXXXXXXX 407
           NAE WQH+  PEV+S EHFPT  +SPD     N+E N     TP  EDRNH         
Sbjct: 32  NAEKWQHE-APEVVSLEHFPTG-SSPDVT---NDESNVS---TPVTEDRNHAIAVAVATA 83

Query: 408 XXXXXXXXXXXXXXXXXRLTGYGRQTREDRAATII 512
                            RL GYGRQ++E+RAA +I
Sbjct: 84  AAAEAAVAAAQAAAKVVRLAGYGRQSKEERAAILI 118


>emb|CBI23014.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/89 (37%), Positives = 45/89 (50%)
 Frame = +3

Query: 246 HDHIPEVMSFEHFPTTETSPDTDVRRNEEENGDQSPTPEEEDRNHXXXXXXXXXXXXXXX 425
           H+  PEV+SFEHFP  E+SP  DV  ++ +  ++  +P   DR+H               
Sbjct: 51  HNEAPEVVSFEHFP-AESSP--DVTNDDSDREEEGSSPVTGDRSHAIAVAVATAAAAEAA 107

Query: 426 XXXXXXXXXXXRLTGYGRQTREDRAATII 512
                      RL GYGR ++EDRAATII
Sbjct: 108 VAAAQAAAKVVRLAGYGRHSKEDRAATII 136


>ref|XP_002272529.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis vinifera]
          Length = 466

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/89 (37%), Positives = 45/89 (50%)
 Frame = +3

Query: 246 HDHIPEVMSFEHFPTTETSPDTDVRRNEEENGDQSPTPEEEDRNHXXXXXXXXXXXXXXX 425
           H+  PEV+SFEHFP  E+SP  DV  ++ +  ++  +P   DR+H               
Sbjct: 39  HNEAPEVVSFEHFP-AESSP--DVTNDDSDREEEGSSPVTGDRSHAIAVAVATAAAAEAA 95

Query: 426 XXXXXXXXXXXRLTGYGRQTREDRAATII 512
                      RL GYGR ++EDRAATII
Sbjct: 96  VAAAQAAAKVVRLAGYGRHSKEDRAATII 124


>ref|XP_002516665.1| conserved hypothetical protein [Ricinus communis]
           gi|223544160|gb|EEF45684.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 452

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/95 (38%), Positives = 44/95 (46%)
 Frame = +3

Query: 228 NAEIWQHDHIPEVMSFEHFPTTETSPDTDVRRNEEENGDQSPTPEEEDRNHXXXXXXXXX 407
           N E WQ    PE ++FEHFP  E+SPD     N EE+   S     EDRNH         
Sbjct: 31  NTEKWQLQ-APEEVTFEHFPA-ESSPDVT---NNEESSTTSTPLSVEDRNHAIAVAMATA 85

Query: 408 XXXXXXXXXXXXXXXXXRLTGYGRQTREDRAATII 512
                            RL GYGR +RE+RAAT+I
Sbjct: 86  AAAEAAVAAAQAAAKVVRLAGYGRHSREERAATLI 120


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