BLASTX nr result

ID: Coptis24_contig00024784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024784
         (1269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314077.1| NAC domain protein, IPR003441 [Populus trich...    54   4e-11
gb|ADL36807.1| NAC domain class transcription factor [Malus x do...    54   4e-11
ref|XP_004135168.1| PREDICTED: NAC transcription factor 29-like ...    49   4e-11
ref|XP_004149287.1| PREDICTED: NAC transcription factor 25-like ...    53   7e-11
ref|XP_004174082.1| PREDICTED: LOW QUALITY PROTEIN: NAC transcri...    53   7e-11

>ref|XP_002314077.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222850485|gb|EEE88032.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 386

 Score = 53.9 bits (128), Expect(2) = 4e-11
 Identities = 24/50 (48%), Positives = 34/50 (68%)
 Frame = +1

Query: 85  RKYKEGDRPDHEASNGYWKASGSKKELIDQDKRKVGLTRALVYYEGKKLK 234
           +KY+ G RP+  A  GYWKA+G+ K+++  DK  VG  ++LVYY GK  K
Sbjct: 148 KKYRNGTRPNRAAGGGYWKATGADKKIV-HDKAIVGYRKSLVYYNGKAPK 196



 Score = 41.2 bits (95), Expect(2) = 4e-11
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +3

Query: 249 GKKTDWIMHELWIPKYQIPKNKQSNCMKLDDWVLYKIHYNITRDKSKRQEGSDNEDDVV 425
           G KT+W+MHE  +     P     N M+LD+WVL +I+  I +    R++ S  +  ++
Sbjct: 197 GDKTNWMMHEFRMEAAAPPIRNNINDMRLDEWVLCRIYKKIQKPVKYREQFSSQKHQLL 255


>gb|ADL36807.1| NAC domain class transcription factor [Malus x domestica]
          Length = 364

 Score = 53.5 bits (127), Expect(2) = 4e-11
 Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
 Frame = +1

Query: 85  RKYKEGDRPDHEASNGYWKASGSKKELIDQ-DKRKVGLTRALVYYEGKKLK 234
           RKY  G RP+  A++GYWKA+G+ K ++   D +KVG+ +ALV+Y GK  K
Sbjct: 89  RKYPNGARPNRAATSGYWKATGTDKPVLTSGDTQKVGVKKALVFYGGKPPK 139



 Score = 41.6 bits (96), Expect(2) = 4e-11
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
 Frame = +3

Query: 237 KDNPGKKTDWIMHELWIPKYQIPKNKQSNC--------MKLDDWVLYKIHYNITRDKSKR 392
           K   G KT+WIMHE  +   + P NK   C        M+LDDWVL +I+      +   
Sbjct: 136 KPPKGIKTNWIMHEYRLADNK-PNNKPPGCDLGNKKNSMRLDDWVLCRIYKKNNTHRPMD 194

Query: 393 QEGSDNEDDVV 425
            E  D+ +D++
Sbjct: 195 HEREDSMEDIM 205


>ref|XP_004135168.1| PREDICTED: NAC transcription factor 29-like [Cucumis sativus]
           gi|449530426|ref|XP_004172196.1| PREDICTED: NAC
           transcription factor 29-like [Cucumis sativus]
          Length = 290

 Score = 49.3 bits (116), Expect(2) = 4e-11
 Identities = 24/50 (48%), Positives = 33/50 (66%)
 Frame = +1

Query: 85  RKYKEGDRPDHEASNGYWKASGSKKELIDQDKRKVGLTRALVYYEGKKLK 234
           RKY  G RP+  A +GYWKA+G+ K +    K  VG+ +ALV+Y+GK  K
Sbjct: 73  RKYPNGVRPNRAAVSGYWKATGTDKAIYSASK-YVGVKKALVFYKGKPPK 121



 Score = 45.8 bits (107), Expect(2) = 4e-11
 Identities = 24/59 (40%), Positives = 33/59 (55%)
 Frame = +3

Query: 231 KVKDNPGKKTDWIMHELWIPKYQIPKNKQSNCMKLDDWVLYKIHYNITRDKSKRQEGSD 407
           K K   G KTDWIMHE  + +      KQS  M+LDDWVL +I+     +K   +E ++
Sbjct: 116 KGKPPKGVKTDWIMHEYRLIESNKQSMKQSGSMRLDDWVLCRIYKKRHSNKGLLEEKTE 174


>ref|XP_004149287.1| PREDICTED: NAC transcription factor 25-like [Cucumis sativus]
          Length = 353

 Score = 53.1 bits (126), Expect(2) = 7e-11
 Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
 Frame = +1

Query: 85  RKYKEGDRPDHEASNGYWKASGSKKELI--DQDKRKVGLTRALVYYEGKKLK 234
           RKY  G RP+  A++GYWKA+G+ K ++  D   +KVG+ +ALV+Y GK  K
Sbjct: 80  RKYPNGARPNRAATSGYWKATGTDKPVLASDGSNQKVGVKKALVFYGGKPPK 131



 Score = 41.2 bits (95), Expect(2) = 7e-11
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
 Frame = +3

Query: 237 KDNPGKKTDWIMHELWI----------PKYQIPKNKQSNCMKLDDWVLYKIHYNITRDKS 386
           K   G KT+WIMHE  +          P Y +   K  N +KLDDWVL +I+      + 
Sbjct: 128 KPPKGIKTNWIMHEYRLADNKPCINKPPGYDLANKK--NSLKLDDWVLCRIYKKNNSHRP 185

Query: 387 KRQEGSDNEDDVV 425
             QE  D+ ++++
Sbjct: 186 MDQEREDSMEEMI 198


>ref|XP_004174082.1| PREDICTED: LOW QUALITY PROTEIN: NAC transcription factor 25-like,
           partial [Cucumis sativus]
          Length = 333

 Score = 53.1 bits (126), Expect(2) = 7e-11
 Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
 Frame = +1

Query: 85  RKYKEGDRPDHEASNGYWKASGSKKELI--DQDKRKVGLTRALVYYEGKKLK 234
           RKY  G RP+  A++GYWKA+G+ K ++  D   +KVG+ +ALV+Y GK  K
Sbjct: 60  RKYPNGARPNRAATSGYWKATGTDKPVLASDGSNQKVGVKKALVFYGGKPPK 111



 Score = 41.2 bits (95), Expect(2) = 7e-11
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
 Frame = +3

Query: 237 KDNPGKKTDWIMHELWI----------PKYQIPKNKQSNCMKLDDWVLYKIHYNITRDKS 386
           K   G KT+WIMHE  +          P Y +   K  N +KLDDWVL +I+      + 
Sbjct: 108 KPPKGIKTNWIMHEYRLADNKPCINKPPGYDLANKK--NSLKLDDWVLCRIYKKNNSHRP 165

Query: 387 KRQEGSDNEDDVV 425
             QE  D+ ++++
Sbjct: 166 MDQEREDSMEEMI 178


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