BLASTX nr result

ID: Coptis24_contig00024782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024782
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303717.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002530120.1| Leucine-rich repeat receptor protein kinase ...   117   1e-24
ref|XP_002270944.2| PREDICTED: LRR receptor-like serine/threonin...   116   2e-24
ref|XP_002265191.2| PREDICTED: LRR receptor-like serine/threonin...   113   1e-23
emb|CBI27385.3| unnamed protein product [Vitis vinifera]              113   1e-23

>ref|XP_002303717.1| predicted protein [Populus trichocarpa] gi|222841149|gb|EEE78696.1|
            predicted protein [Populus trichocarpa]
          Length = 1254

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/89 (62%), Positives = 69/89 (77%)
 Frame = -3

Query: 268  RQARELKCAYSSCSSQIQRRLLFQGGPIKRKFKWDDIMKATNNLSDAYVIGSGGSGMVYK 89
            R+  E+KC YSS SSQ QR+ LF+ G  KR ++WDDIM ATNNLSD ++IGSGGSG +Y+
Sbjct: 907  RRVSEVKCIYSSSSSQAQRKPLFRKGTAKRDYRWDDIMAATNNLSDEFIIGSGGSGTIYR 966

Query: 88   AELPTGETVAVKKILRKDDLLLYRSFVRE 2
             E  +GETVAVKKIL KD+ LL +SF RE
Sbjct: 967  TEFQSGETVAVKKILWKDEFLLNKSFARE 995


>ref|XP_002530120.1| Leucine-rich repeat receptor protein kinase EXS precursor, putative
            [Ricinus communis] gi|223530374|gb|EEF32264.1|
            Leucine-rich repeat receptor protein kinase EXS
            precursor, putative [Ricinus communis]
          Length = 1257

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/89 (64%), Positives = 71/89 (79%)
 Frame = -3

Query: 268  RQARELKCAYSSCSSQIQRRLLFQGGPIKRKFKWDDIMKATNNLSDAYVIGSGGSGMVYK 89
            ++  EL   YSS SS+ QR+ LFQ G  K+ F+W+DIMKAT+NLSDA++IGSGGSG +Y+
Sbjct: 910  KRENELNLIYSSSSSKAQRKPLFQNGVAKKDFRWEDIMKATDNLSDAFIIGSGGSGTIYR 969

Query: 88   AELPTGETVAVKKILRKDDLLLYRSFVRE 2
            AEL TGETVAVK+IL KDD LL +SF RE
Sbjct: 970  AELHTGETVAVKRILWKDDYLLNKSFTRE 998


>ref|XP_002270944.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           GSO1-like [Vitis vinifera]
          Length = 709

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/91 (64%), Positives = 68/91 (74%)
 Frame = -3

Query: 274 RRRQARELKCAYSSCSSQIQRRLLFQGGPIKRKFKWDDIMKATNNLSDAYVIGSGGSGMV 95
           +R    E+KC YSS SS + RR L      KR FKW DIM+ATNNLSD ++IGSGGSG +
Sbjct: 363 KRESLNEVKCVYSSSSSIVHRRPLLPNAAGKRDFKWGDIMQATNNLSDNFIIGSGGSGTI 422

Query: 94  YKAELPTGETVAVKKILRKDDLLLYRSFVRE 2
           YKAEL + ETVAVKKILRKDDLLL +SF RE
Sbjct: 423 YKAELSSEETVAVKKILRKDDLLLNKSFERE 453


>ref|XP_002265191.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            GSO1-like [Vitis vinifera]
          Length = 1254

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/91 (63%), Positives = 67/91 (73%)
 Frame = -3

Query: 274  RRRQARELKCAYSSCSSQIQRRLLFQGGPIKRKFKWDDIMKATNNLSDAYVIGSGGSGMV 95
            +R     +KC YSS SS + RR L      KR FKW DIM+ATNNLSD ++IGSGGSG +
Sbjct: 907  KRESLNAVKCVYSSSSSIVHRRPLLPNTAGKRDFKWGDIMQATNNLSDNFIIGSGGSGTI 966

Query: 94   YKAELPTGETVAVKKILRKDDLLLYRSFVRE 2
            YKAEL + ETVAVKKILRKDDLLL +SF RE
Sbjct: 967  YKAELSSEETVAVKKILRKDDLLLNKSFERE 997


>emb|CBI27385.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/91 (63%), Positives = 67/91 (73%)
 Frame = -3

Query: 274 RRRQARELKCAYSSCSSQIQRRLLFQGGPIKRKFKWDDIMKATNNLSDAYVIGSGGSGMV 95
           +R     +KC YSS SS + RR L      KR FKW DIM+ATNNLSD ++IGSGGSG +
Sbjct: 518 KRESLNAVKCVYSSSSSIVHRRPLLPNTAGKRDFKWGDIMQATNNLSDNFIIGSGGSGTI 577

Query: 94  YKAELPTGETVAVKKILRKDDLLLYRSFVRE 2
           YKAEL + ETVAVKKILRKDDLLL +SF RE
Sbjct: 578 YKAELSSEETVAVKKILRKDDLLLNKSFERE 608


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