BLASTX nr result
ID: Coptis24_contig00024762
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024762 (402 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312513.1| predicted protein [Populus trichocarpa] gi|2... 40 3e-07 ref|XP_002314724.1| predicted protein [Populus trichocarpa] gi|2... 41 8e-07 ref|XP_002521024.1| conserved hypothetical protein [Ricinus comm... 39 1e-06 ref|XP_003517774.1| PREDICTED: uncharacterized protein LOC100799... 38 4e-06 ref|XP_003551189.1| PREDICTED: uncharacterized protein LOC100781... 40 8e-06 >ref|XP_002312513.1| predicted protein [Populus trichocarpa] gi|222852333|gb|EEE89880.1| predicted protein [Populus trichocarpa] Length = 494 Score = 39.7 bits (91), Expect(2) = 3e-07 Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%) Frame = +3 Query: 108 HYPQKSSKVFSNNLAL-DEDEPPSIEAKTPTPKKT 209 H Q SS ++ + DEDEPPSIE++TPTP+KT Sbjct: 357 HQKQLSSWPVQDSFVIPDEDEPPSIESRTPTPRKT 391 Score = 39.7 bits (91), Expect(2) = 3e-07 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = +1 Query: 196 PQKRHVFMAQDPEKTHHVRQSRAPCNGWDGD 288 P+K + FM++D EK H RQ R+ +GWDGD Sbjct: 388 PRKTYPFMSKDTEKMHQWRQGRSIYSGWDGD 418 >ref|XP_002314724.1| predicted protein [Populus trichocarpa] gi|222863764|gb|EEF00895.1| predicted protein [Populus trichocarpa] Length = 487 Score = 41.2 bits (95), Expect(2) = 8e-07 Identities = 17/31 (54%), Positives = 23/31 (74%) Frame = +1 Query: 196 PQKRHVFMAQDPEKTHHVRQSRAPCNGWDGD 288 P+K + FM++D EK H RQSR+ +GWDGD Sbjct: 383 PRKTYPFMSKDTEKMHQWRQSRSIYSGWDGD 413 Score = 36.6 bits (83), Expect(2) = 8e-07 Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 2/36 (5%) Frame = +3 Query: 108 HYPQKSSK--VFSNNLALDEDEPPSIEAKTPTPKKT 209 +Y Q+S+ V + + DEDEPPS E +TPTP+KT Sbjct: 351 NYQQQSTSWPVQDSFVIPDEDEPPSTETRTPTPRKT 386 >ref|XP_002521024.1| conserved hypothetical protein [Ricinus communis] gi|223539861|gb|EEF41441.1| conserved hypothetical protein [Ricinus communis] Length = 500 Score = 39.3 bits (90), Expect(2) = 1e-06 Identities = 16/18 (88%), Positives = 17/18 (94%) Frame = +3 Query: 156 DEDEPPSIEAKTPTPKKT 209 DEDEPPSIE +TPTPKKT Sbjct: 376 DEDEPPSIETRTPTPKKT 393 Score = 37.7 bits (86), Expect(2) = 1e-06 Identities = 16/31 (51%), Positives = 21/31 (67%) Frame = +1 Query: 196 PQKRHVFMAQDPEKTHHVRQSRAPCNGWDGD 288 P+K + FM++D EK H RQ RA +GWD D Sbjct: 390 PKKTYPFMSKDAEKMHQWRQGRAFYSGWDDD 420 >ref|XP_003517774.1| PREDICTED: uncharacterized protein LOC100799483 [Glycine max] Length = 508 Score = 38.1 bits (87), Expect(2) = 4e-06 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = +1 Query: 196 PQKRHVFMAQDPEKTHHVRQSRAPCNGWDGD 288 P+K + FM++D EK + QSRA +GWDGD Sbjct: 389 PRKTYAFMSKDAEKMQQLWQSRAFYSGWDGD 419 Score = 37.4 bits (85), Expect(2) = 4e-06 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 3/38 (7%) Frame = +3 Query: 105 FHYPQKSSKVF---SNNLALDEDEPPSIEAKTPTPKKT 209 F PQK + + + DEDEPPSI+ +TPTP+KT Sbjct: 355 FQQPQKQVNAWPVQESFVIPDEDEPPSIDPRTPTPRKT 392 >ref|XP_003551189.1| PREDICTED: uncharacterized protein LOC100781836 [Glycine max] Length = 493 Score = 40.4 bits (93), Expect(2) = 8e-06 Identities = 17/31 (54%), Positives = 23/31 (74%) Frame = +1 Query: 196 PQKRHVFMAQDPEKTHHVRQSRAPCNGWDGD 288 P+K + FM++D EK +RQSRA +GWDGD Sbjct: 384 PRKTYPFMSKDAEKMQQLRQSRAFYSGWDGD 414 Score = 33.9 bits (76), Expect(2) = 8e-06 Identities = 12/18 (66%), Positives = 16/18 (88%) Frame = +3 Query: 156 DEDEPPSIEAKTPTPKKT 209 DED+PPSI+ + PTP+KT Sbjct: 370 DEDQPPSIDTRAPTPRKT 387