BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024747
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006291790.1| orf28 gene product (mitochondrion) [Daucus c...    66   1e-11

>ref|YP_006291790.1| orf28 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081974|gb|AEY81166.1| orf28 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 124

 Score = 66.2 bits (160), Expect(2) = 1e-11
 Identities = 38/64 (59%), Positives = 41/64 (64%)
 Frame = -2

Query: 358 NPARINNEAIQELLALLSSTRAMPSLAFGXXXXXXXXXXXSIGWR*GFPVVLVLIIYLIS 179
           NPARINN+ + ELLALL   R +P                SIGWR GFPVVLVLIIYLIS
Sbjct: 9   NPARINNDEVPELLALLELCRLLP----------LGRCPSSIGWRWGFPVVLVLIIYLIS 58

Query: 178 PARH 167
           PARH
Sbjct: 59  PARH 62



 Score = 29.3 bits (64), Expect(2) = 1e-11
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = -3

Query: 171 GMS*LFRCELRFTRS 127
           GM  LFRCELRFTRS
Sbjct: 63  GMPSLFRCELRFTRS 77