BLASTX nr result

ID: Coptis24_contig00024746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024746
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283435.1| PREDICTED: GPI mannosyltransferase 2 [Vitis ...    50   2e-10
ref|XP_002527781.1| conserved hypothetical protein [Ricinus comm...    43   6e-08
tpg|DAA59083.1| TPA: hypothetical protein ZEAMMB73_378923 [Zea m...    47   2e-07
ref|XP_002892659.1| hypothetical protein ARALYDRAFT_471336 [Arab...    42   3e-07
tpg|DAA52660.1| TPA: hypothetical protein ZEAMMB73_143412 [Zea m...    45   5e-07

>ref|XP_002283435.1| PREDICTED: GPI mannosyltransferase 2 [Vitis vinifera]
           gi|297746434|emb|CBI16490.3| unnamed protein product
           [Vitis vinifera]
          Length = 497

 Score = 50.1 bits (118), Expect(2) = 2e-10
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = +3

Query: 624 VFALFVLLIWYRAILGLSGYVINNITFVFTAICFYRYIICFLME 755
           VFA  + LI +RA+LGLSGYV+NNI FV  A+ FY+  +  L +
Sbjct: 112 VFAPLIPLIGHRAVLGLSGYVLNNIAFVLAAVYFYKLSVIILKD 155



 Score = 42.0 bits (97), Expect(2) = 2e-10
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +1

Query: 460 KCGYEYKQTYVFLPLLPTCLYVFSNT 537
           +CGYEY+Q+Y FLPLLP C+   S T
Sbjct: 86  QCGYEYEQSYAFLPLLPICISFLSRT 111


>ref|XP_002527781.1| conserved hypothetical protein [Ricinus communis]
           gi|223532816|gb|EEF34591.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 500

 Score = 42.7 bits (99), Expect(2) = 6e-08
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = +1

Query: 460 KCGYEYKQTYVFLPLLPTCLYVFSNT 537
           +CGYEY+Q+Y FLPLLP  +++FS T
Sbjct: 88  ECGYEYEQSYAFLPLLPIFMFLFSRT 113



 Score = 41.2 bits (95), Expect(2) = 6e-08
 Identities = 19/44 (43%), Positives = 27/44 (61%)
 Frame = +3

Query: 624 VFALFVLLIWYRAILGLSGYVINNITFVFTAICFYRYIICFLME 755
           VFA     I  RA+L L+GYV+NN+ FV +A+  YR  +  L +
Sbjct: 114 VFAPLAPFIGVRAVLALAGYVVNNVAFVLSAVYLYRLSVRILKD 157


>tpg|DAA59083.1| TPA: hypothetical protein ZEAMMB73_378923 [Zea mays]
          Length = 496

 Score = 46.6 bits (109), Expect(2) = 2e-07
 Identities = 23/48 (47%), Positives = 31/48 (64%)
 Frame = +3

Query: 612 LGILVFALFVLLIWYRAILGLSGYVINNITFVFTAICFYRYIICFLME 755
           L  L+FA  V ++ YRA+L LSGYV+NN+ FV  A  FYR  +  L +
Sbjct: 99  LARLLFAPLVPILGYRAVLVLSGYVLNNVAFVAAAAYFYRLSVLILKD 146



 Score = 35.8 bits (81), Expect(2) = 2e-07
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = +1

Query: 460 KCGYEYKQTYVFLPLLPTCLYVFS 531
           +CGYEY+Q++ FLPLLP  L + +
Sbjct: 77  ECGYEYEQSFAFLPLLPASLVLLA 100


>ref|XP_002892659.1| hypothetical protein ARALYDRAFT_471336 [Arabidopsis lyrata subsp.
           lyrata] gi|297338501|gb|EFH68918.1| hypothetical protein
           ARALYDRAFT_471336 [Arabidopsis lyrata subsp. lyrata]
          Length = 494

 Score = 42.0 bits (97), Expect(2) = 3e-07
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = +1

Query: 460 KCGYEYKQTYVFLPLLPTCLYVFSNT 537
           +CGYEY+QTY FLPLLP  + +FS T
Sbjct: 88  ECGYEYEQTYAFLPLLPFFISLFSRT 113



 Score = 39.7 bits (91), Expect(2) = 3e-07
 Identities = 18/44 (40%), Positives = 28/44 (63%)
 Frame = +3

Query: 624 VFALFVLLIWYRAILGLSGYVINNITFVFTAICFYRYIICFLME 755
           VFA  V LI  RA++ LSGY+++N+ F+  AI  +R  +  L +
Sbjct: 114 VFAPLVPLIGLRAVMVLSGYIVSNLAFILAAIYLFRLSVIILKD 157


>tpg|DAA52660.1| TPA: hypothetical protein ZEAMMB73_143412 [Zea mays]
          Length = 448

 Score = 44.7 bits (104), Expect(2) = 5e-07
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = +3

Query: 624 VFALFVLLIWYRAILGLSGYVINNITFVFTAICFYRYIICFLME 755
           +FA  V ++ YRA+L LSGYV+NN+ FV  A  FYR  +  L +
Sbjct: 103 LFAPLVPILGYRAVLVLSGYVLNNVAFVAAAAYFYRLSVLILKD 146



 Score = 36.2 bits (82), Expect(2) = 5e-07
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = +1

Query: 460 KCGYEYKQTYVFLPLLPTCLYVFSNT 537
           +CGYEY+Q++ FLPLLP  L + + +
Sbjct: 77  ECGYEYEQSFAFLPLLPASLVLLARS 102


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