BLASTX nr result
ID: Coptis24_contig00024745
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024745 (396 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vini... 107 1e-21 emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera] 107 1e-21 ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vini... 106 2e-21 emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera] 106 2e-21 ref|XP_002315778.1| predicted protein [Populus trichocarpa] gi|2... 94 2e-17 >ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737032|emb|CBI26233.3| unnamed protein product [Vitis vinifera] Length = 667 Score = 107 bits (266), Expect = 1e-21 Identities = 51/83 (61%), Positives = 62/83 (74%), Gaps = 1/83 (1%) Frame = +1 Query: 151 HSQSHPLDPLTPKEFIQIQTIIKQSQPDPIYNISFHYVGLDDPDKQAILLWHSS-NHSTQ 327 HSQ HPLD LTP EF Q+Q I+K S P N++F YVGLD+PDK +L W S+ N +T Sbjct: 19 HSQYHPLDSLTPSEFHQVQAIVKGSNPGSSLNMTFQYVGLDEPDKSIVLSWLSNPNSTTP 78 Query: 328 PPPRRAFVITRINKQSHETIVDL 396 PPPRRAFVITR++ Q+HE IVDL Sbjct: 79 PPPRRAFVITRLHSQTHEIIVDL 101 >emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera] Length = 654 Score = 107 bits (266), Expect = 1e-21 Identities = 51/83 (61%), Positives = 62/83 (74%), Gaps = 1/83 (1%) Frame = +1 Query: 151 HSQSHPLDPLTPKEFIQIQTIIKQSQPDPIYNISFHYVGLDDPDKQAILLWHSS-NHSTQ 327 HSQ HPLD LTP EF Q+Q I+K S P N++F YVGLD+PDK +L W S+ N +T Sbjct: 19 HSQYHPLDSLTPSEFHQVQAIVKGSNPGSSLNMTFQYVGLDEPDKSIVLSWLSNPNSTTP 78 Query: 328 PPPRRAFVITRINKQSHETIVDL 396 PPPRRAFVITR++ Q+HE IVDL Sbjct: 79 PPPRRAFVITRLHSQTHEIIVDL 101 >ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737034|emb|CBI26235.3| unnamed protein product [Vitis vinifera] Length = 674 Score = 106 bits (264), Expect = 2e-21 Identities = 50/83 (60%), Positives = 62/83 (74%), Gaps = 1/83 (1%) Frame = +1 Query: 151 HSQSHPLDPLTPKEFIQIQTIIKQSQPDPIYNISFHYVGLDDPDKQAILLWHSS-NHSTQ 327 HS HPLD LTP EF Q+Q I+ S P +N++F YVGLD+PDK A+L W S+ N +T Sbjct: 24 HSHHHPLDSLTPSEFRQVQAIVNGSNPGSSHNVTFQYVGLDEPDKPALLSWLSNPNSTTL 83 Query: 328 PPPRRAFVITRINKQSHETIVDL 396 PPPRRAFVITR++ Q+HE IVDL Sbjct: 84 PPPRRAFVITRLHSQTHEIIVDL 106 >emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera] Length = 644 Score = 106 bits (264), Expect = 2e-21 Identities = 50/83 (60%), Positives = 62/83 (74%), Gaps = 1/83 (1%) Frame = +1 Query: 151 HSQSHPLDPLTPKEFIQIQTIIKQSQPDPIYNISFHYVGLDDPDKQAILLWHSS-NHSTQ 327 HS HPLD LTP EF Q+Q I+ S P +N++F YVGLD+PDK A+L W S+ N +T Sbjct: 24 HSHHHPLDSLTPSEFRQVQAIVNGSNPGSSHNVTFQYVGLDEPDKPALLSWLSNPNSTTL 83 Query: 328 PPPRRAFVITRINKQSHETIVDL 396 PPPRRAFVITR++ Q+HE IVDL Sbjct: 84 PPPRRAFVITRLHSQTHEIIVDL 106 >ref|XP_002315778.1| predicted protein [Populus trichocarpa] gi|222864818|gb|EEF01949.1| predicted protein [Populus trichocarpa] Length = 258 Score = 93.6 bits (231), Expect = 2e-17 Identities = 47/79 (59%), Positives = 58/79 (73%), Gaps = 1/79 (1%) Frame = +1 Query: 163 HPLDPLTPKEFIQIQTIIKQS-QPDPIYNISFHYVGLDDPDKQAILLWHSSNHSTQPPPR 339 HPLDPL+PKE +QTI+K+S P NISFHYVGLD+P+K +L W S ST+ PR Sbjct: 25 HPLDPLSPKELTLVQTIVKKSYNPSSNNNISFHYVGLDEPEKTTVLSW-LSKPSTKTLPR 83 Query: 340 RAFVITRINKQSHETIVDL 396 RA V TR+N+Q+HE IVDL Sbjct: 84 RALVFTRVNEQTHEIIVDL 102