BLASTX nr result

ID: Coptis24_contig00024745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024745
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vini...   107   1e-21
emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera]   107   1e-21
ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vini...   106   2e-21
emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera]   106   2e-21
ref|XP_002315778.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17

>ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vinifera]
           gi|297737032|emb|CBI26233.3| unnamed protein product
           [Vitis vinifera]
          Length = 667

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/83 (61%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
 Frame = +1

Query: 151 HSQSHPLDPLTPKEFIQIQTIIKQSQPDPIYNISFHYVGLDDPDKQAILLWHSS-NHSTQ 327
           HSQ HPLD LTP EF Q+Q I+K S P    N++F YVGLD+PDK  +L W S+ N +T 
Sbjct: 19  HSQYHPLDSLTPSEFHQVQAIVKGSNPGSSLNMTFQYVGLDEPDKSIVLSWLSNPNSTTP 78

Query: 328 PPPRRAFVITRINKQSHETIVDL 396
           PPPRRAFVITR++ Q+HE IVDL
Sbjct: 79  PPPRRAFVITRLHSQTHEIIVDL 101


>emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera]
          Length = 654

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/83 (61%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
 Frame = +1

Query: 151 HSQSHPLDPLTPKEFIQIQTIIKQSQPDPIYNISFHYVGLDDPDKQAILLWHSS-NHSTQ 327
           HSQ HPLD LTP EF Q+Q I+K S P    N++F YVGLD+PDK  +L W S+ N +T 
Sbjct: 19  HSQYHPLDSLTPSEFHQVQAIVKGSNPGSSLNMTFQYVGLDEPDKSIVLSWLSNPNSTTP 78

Query: 328 PPPRRAFVITRINKQSHETIVDL 396
           PPPRRAFVITR++ Q+HE IVDL
Sbjct: 79  PPPRRAFVITRLHSQTHEIIVDL 101


>ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera]
           gi|297737034|emb|CBI26235.3| unnamed protein product
           [Vitis vinifera]
          Length = 674

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/83 (60%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
 Frame = +1

Query: 151 HSQSHPLDPLTPKEFIQIQTIIKQSQPDPIYNISFHYVGLDDPDKQAILLWHSS-NHSTQ 327
           HS  HPLD LTP EF Q+Q I+  S P   +N++F YVGLD+PDK A+L W S+ N +T 
Sbjct: 24  HSHHHPLDSLTPSEFRQVQAIVNGSNPGSSHNVTFQYVGLDEPDKPALLSWLSNPNSTTL 83

Query: 328 PPPRRAFVITRINKQSHETIVDL 396
           PPPRRAFVITR++ Q+HE IVDL
Sbjct: 84  PPPRRAFVITRLHSQTHEIIVDL 106


>emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera]
          Length = 644

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/83 (60%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
 Frame = +1

Query: 151 HSQSHPLDPLTPKEFIQIQTIIKQSQPDPIYNISFHYVGLDDPDKQAILLWHSS-NHSTQ 327
           HS  HPLD LTP EF Q+Q I+  S P   +N++F YVGLD+PDK A+L W S+ N +T 
Sbjct: 24  HSHHHPLDSLTPSEFRQVQAIVNGSNPGSSHNVTFQYVGLDEPDKPALLSWLSNPNSTTL 83

Query: 328 PPPRRAFVITRINKQSHETIVDL 396
           PPPRRAFVITR++ Q+HE IVDL
Sbjct: 84  PPPRRAFVITRLHSQTHEIIVDL 106


>ref|XP_002315778.1| predicted protein [Populus trichocarpa] gi|222864818|gb|EEF01949.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 47/79 (59%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = +1

Query: 163 HPLDPLTPKEFIQIQTIIKQS-QPDPIYNISFHYVGLDDPDKQAILLWHSSNHSTQPPPR 339
           HPLDPL+PKE   +QTI+K+S  P    NISFHYVGLD+P+K  +L W  S  ST+  PR
Sbjct: 25  HPLDPLSPKELTLVQTIVKKSYNPSSNNNISFHYVGLDEPEKTTVLSW-LSKPSTKTLPR 83

Query: 340 RAFVITRINKQSHETIVDL 396
           RA V TR+N+Q+HE IVDL
Sbjct: 84  RALVFTRVNEQTHEIIVDL 102


Top