BLASTX nr result

ID: Coptis24_contig00024744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024744
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320987.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
ref|NP_001054693.1| Os05g0155700 [Oryza sativa Japonica Group] g...   212   5e-53
gb|ACG45866.1| hypothetical protein [Zea mays]                        210   2e-52
ref|NP_001131867.1| uncharacterized protein LOC100193245 [Zea ma...   210   2e-52
dbj|BAJ96046.1| predicted protein [Hordeum vulgare subsp. vulgare]    209   2e-52

>ref|XP_002320987.1| predicted protein [Populus trichocarpa] gi|222861760|gb|EEE99302.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score =  216 bits (550), Expect = 2e-54
 Identities = 99/150 (66%), Positives = 120/150 (80%)
 Frame = -3

Query: 599 HTQRIXXXXXXXXXXXXSGYVLKALGIPVSKPLYTLSYMCITAGVSGIVLIIIYYTVDII 420
           H QR+            +GYV + LG+P+ KPLYTLSYMCITAG SG+ L II+Y VD+ 
Sbjct: 332 HMQRLCLWSVCSFIILITGYVFELLGVPLCKPLYTLSYMCITAGASGLALTIIFYIVDVK 391

Query: 419 NFRKPTLLFQWMGMNALVVYALAACELFPAAIQGFYWRTPANNLVDGTELLLQTVFHSKR 240
           +FRKPT++ QWMGMNAL++YALAAC+LFPAAIQGFYW +P NNLVD TE L Q + HSK+
Sbjct: 392 HFRKPTMILQWMGMNALIIYALAACDLFPAAIQGFYWGSPENNLVDDTESLFQVMLHSKK 451

Query: 239 WGTLVFVLLEILFWCLVAGYLHLKGIYVKL 150
           WGTLVFV++EILFW LVAG+LHLKGIYV+L
Sbjct: 452 WGTLVFVIVEILFWGLVAGFLHLKGIYVRL 481


>ref|NP_001054693.1| Os05g0155700 [Oryza sativa Japonica Group]
           gi|54291854|gb|AAV32222.1| unknown protein [Oryza sativa
           Japonica Group] gi|113578244|dbj|BAF16607.1|
           Os05g0155700 [Oryza sativa Japonica Group]
           gi|215694847|dbj|BAG90038.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218196128|gb|EEC78555.1| hypothetical protein
           OsI_18526 [Oryza sativa Indica Group]
           gi|222630256|gb|EEE62388.1| hypothetical protein
           OsJ_17178 [Oryza sativa Japonica Group]
          Length = 491

 Score =  212 bits (539), Expect = 5e-53
 Identities = 95/150 (63%), Positives = 120/150 (80%)
 Frame = -3

Query: 599 HTQRIXXXXXXXXXXXXSGYVLKALGIPVSKPLYTLSYMCITAGVSGIVLIIIYYTVDII 420
           H+ R+            SG++L+ LG+P SKPLYT+SYM +T GVSG +L+++YY VD+I
Sbjct: 342 HSPRMLLWLLASTVLTVSGFLLQLLGMPFSKPLYTVSYMLLTGGVSGFLLLLLYYIVDVI 401

Query: 419 NFRKPTLLFQWMGMNALVVYALAACELFPAAIQGFYWRTPANNLVDGTELLLQTVFHSKR 240
           N +KP +LFQWMGMNAL+VY LAACE+FP  +QGFYWR+P NNLVD TE LLQT+FHSKR
Sbjct: 402 NIKKPFILFQWMGMNALIVYVLAACEIFPTLVQGFYWRSPENNLVDLTESLLQTIFHSKR 461

Query: 239 WGTLVFVLLEILFWCLVAGYLHLKGIYVKL 150
           WGTL FV+LEI+FWCL A +LH+KGIY+KL
Sbjct: 462 WGTLAFVVLEIIFWCLAACFLHMKGIYLKL 491


>gb|ACG45866.1| hypothetical protein [Zea mays]
          Length = 492

 Score =  210 bits (534), Expect = 2e-52
 Identities = 95/151 (62%), Positives = 120/151 (79%)
 Frame = -3

Query: 602 SHTQRIXXXXXXXXXXXXSGYVLKALGIPVSKPLYTLSYMCITAGVSGIVLIIIYYTVDI 423
           +H+QR+            S Y++  LG+P SKPLYT++YM +T GVSG +L+++YY VD+
Sbjct: 342 NHSQRMLIWLLASVVLTISAYLVLLLGMPFSKPLYTVNYMLLTGGVSGFLLLLLYYIVDV 401

Query: 422 INFRKPTLLFQWMGMNALVVYALAACELFPAAIQGFYWRTPANNLVDGTELLLQTVFHSK 243
           I+ +KP +LFQWMGMNAL+VY LAACELFP  IQGFYWR+P NNLVD TE LLQ +F SK
Sbjct: 402 IHIKKPFVLFQWMGMNALIVYVLAACELFPTLIQGFYWRSPENNLVDVTESLLQAIFQSK 461

Query: 242 RWGTLVFVLLEILFWCLVAGYLHLKGIYVKL 150
           RWGTLVFVLLEI+FWCL AG+LH+KG+Y+KL
Sbjct: 462 RWGTLVFVLLEIVFWCLAAGFLHMKGVYLKL 492


>ref|NP_001131867.1| uncharacterized protein LOC100193245 [Zea mays]
           gi|194692766|gb|ACF80467.1| unknown [Zea mays]
           gi|413948803|gb|AFW81452.1| hypothetical protein
           ZEAMMB73_255914 [Zea mays] gi|413948804|gb|AFW81453.1|
           hypothetical protein ZEAMMB73_255914 [Zea mays]
          Length = 492

 Score =  210 bits (534), Expect = 2e-52
 Identities = 95/151 (62%), Positives = 120/151 (79%)
 Frame = -3

Query: 602 SHTQRIXXXXXXXXXXXXSGYVLKALGIPVSKPLYTLSYMCITAGVSGIVLIIIYYTVDI 423
           +H+QR+            S Y++  LG+P SKPLYT++YM +T GVSG +L+++YY VD+
Sbjct: 342 NHSQRMLIWLLASVVLTISAYLVLLLGMPFSKPLYTVNYMLLTGGVSGFLLLLLYYIVDV 401

Query: 422 INFRKPTLLFQWMGMNALVVYALAACELFPAAIQGFYWRTPANNLVDGTELLLQTVFHSK 243
           I+ +KP +LFQWMGMNAL+VY LAACELFP  IQGFYWR+P NNLVD TE LLQ +F SK
Sbjct: 402 IHIKKPFVLFQWMGMNALIVYVLAACELFPTLIQGFYWRSPENNLVDVTESLLQAIFQSK 461

Query: 242 RWGTLVFVLLEILFWCLVAGYLHLKGIYVKL 150
           RWGTLVFVLLEI+FWCL AG+LH+KG+Y+KL
Sbjct: 462 RWGTLVFVLLEIVFWCLAAGFLHMKGVYLKL 492


>dbj|BAJ96046.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 488

 Score =  209 bits (533), Expect = 2e-52
 Identities = 94/151 (62%), Positives = 120/151 (79%)
 Frame = -3

Query: 602 SHTQRIXXXXXXXXXXXXSGYVLKALGIPVSKPLYTLSYMCITAGVSGIVLIIIYYTVDI 423
           +H+QR+            SG++L+ LG+P SKPLYT+SYM +T GVSG VL+++Y  VD+
Sbjct: 338 THSQRMMSWLLASTVLTVSGFLLQLLGMPFSKPLYTVSYMLLTGGVSGFVLLLLYCIVDV 397

Query: 422 INFRKPTLLFQWMGMNALVVYALAACELFPAAIQGFYWRTPANNLVDGTELLLQTVFHSK 243
           I+ +KP +LFQW+GMNAL+VY LAACELFP  IQGFYWR+P NNLVD TE LLQ +FHSK
Sbjct: 398 IHIKKPLILFQWVGMNALIVYVLAACELFPTLIQGFYWRSPENNLVDATESLLQAIFHSK 457

Query: 242 RWGTLVFVLLEILFWCLVAGYLHLKGIYVKL 150
           RWGTL FVL+EI+FWCL A +LH+KG+Y+KL
Sbjct: 458 RWGTLAFVLVEIIFWCLAACFLHIKGVYLKL 488


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