BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024740
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533336.1| pentatricopeptide repeat-containing protein,...   137   6e-30
emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]   136   8e-30
emb|CBI21173.3| unnamed protein product [Vitis vinifera]              134   4e-29
ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat...   134   5e-29
ref|XP_002310370.1| predicted protein [Populus trichocarpa] gi|2...   129   1e-27

>ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526827|gb|EEF29045.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 708

 Score =  137 bits (344), Expect = 6e-30
 Identities = 67/121 (55%), Positives = 80/121 (66%)
 Frame = +2

Query: 2   ACRIKGDIELASDVAKLLLVLEPEEHCTYVLLSNMYGNLGRWDERANXXXXXXXXXXXXL 181
           ACR  GDIELA+ VA  LL LEPEEHCTYV+LSNMYG+L RWDE+A             +
Sbjct: 583 ACRACGDIELAAQVASHLLELEPEEHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKV 642

Query: 182 PGWSWVEVKNEVHAFNAEDRLHTQCEEIYLILGALVEEINWLSGCGDVDFHICSFDFGSS 361
           PGWSW+EVKNEVHAF A+DR H+  EEIY IL  L+E+I WL      D  +   D+  +
Sbjct: 643 PGWSWIEVKNEVHAFIADDRCHSHFEEIYQILEQLMEDIKWLDSVAGSDSLLDDVDYSYT 702

Query: 362 Y 364
           Y
Sbjct: 703 Y 703


>emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
          Length = 800

 Score =  136 bits (343), Expect = 8e-30
 Identities = 71/120 (59%), Positives = 84/120 (70%)
 Frame = +2

Query: 2   ACRIKGDIELASDVAKLLLVLEPEEHCTYVLLSNMYGNLGRWDERANXXXXXXXXXXXXL 181
           ACR  GDIELAS VA  LL LEPEEHCTYVLLS+M+G+L RW+E+A+            +
Sbjct: 562 ACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKV 621

Query: 182 PGWSWVEVKNEVHAFNAEDRLHTQCEEIYLILGALVEEINWLSGCGDVDFHICSFDFGSS 361
           PGWSW+EVKNEVH+FNAEDR H  CEEIYL LG L+EEI  L    + +  I S+  GSS
Sbjct: 622 PGWSWIEVKNEVHSFNAEDRSHPNCEEIYLRLGDLMEEIRRLDYVANSE--IMSYLSGSS 679


>emb|CBI21173.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  134 bits (337), Expect = 4e-29
 Identities = 66/110 (60%), Positives = 78/110 (70%)
 Frame = +2

Query: 2   ACRIKGDIELASDVAKLLLVLEPEEHCTYVLLSNMYGNLGRWDERANXXXXXXXXXXXXL 181
           ACR  GDIELAS VA  LL LEPEEHCTYVLLS+M+G+L RW+E+A+            +
Sbjct: 483 ACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKV 542

Query: 182 PGWSWVEVKNEVHAFNAEDRLHTQCEEIYLILGALVEEINWLSGCGDVDF 331
           PGWSW+EVKNEV +FNAEDR H  CEEIYL LG L+EEI  L    + +F
Sbjct: 543 PGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELMEEIRRLDYVANSEF 592


>ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  134 bits (336), Expect = 5e-29
 Identities = 70/120 (58%), Positives = 83/120 (69%)
 Frame = +2

Query: 2   ACRIKGDIELASDVAKLLLVLEPEEHCTYVLLSNMYGNLGRWDERANXXXXXXXXXXXXL 181
           ACR  GDIELAS VA  LL LEPEEHCTYVLLS+M+G+L RW+E+A+            +
Sbjct: 584 ACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKV 643

Query: 182 PGWSWVEVKNEVHAFNAEDRLHTQCEEIYLILGALVEEINWLSGCGDVDFHICSFDFGSS 361
           PGWSW+EVKNEV +FNAEDR H  CEEIYL LG L+EEI  L    + +  I S+  GSS
Sbjct: 644 PGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELMEEIRRLDYVANSE--IMSYLSGSS 701


>ref|XP_002310370.1| predicted protein [Populus trichocarpa] gi|222853273|gb|EEE90820.1|
           predicted protein [Populus trichocarpa]
          Length = 711

 Score =  129 bits (324), Expect = 1e-27
 Identities = 61/109 (55%), Positives = 75/109 (68%)
 Frame = +2

Query: 2   ACRIKGDIELASDVAKLLLVLEPEEHCTYVLLSNMYGNLGRWDERANXXXXXXXXXXXXL 181
           ACR  G+IELA+ VA  LL +EPEEHCTYV+LSNMYG+L RWD++A+            +
Sbjct: 586 ACRACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHLKRWDDKASVTRLMRERKVKKV 645

Query: 182 PGWSWVEVKNEVHAFNAEDRLHTQCEEIYLILGALVEEINWLSGCGDVD 328
           PGWSW+EVKNEVHAF AEDR H   E++Y ILG L+EE+  L      D
Sbjct: 646 PGWSWIEVKNEVHAFKAEDRSHPYSEDVYQILGELMEEMKRLHSLASFD 694