BLASTX nr result

ID: Coptis24_contig00024738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024738
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336061.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42
ref|XP_002298641.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42
ref|XP_003622132.1| Amino acid binding protein, putative [Medica...   167   1e-39
ref|XP_003622131.1| Amino acid binding protein, putative [Medica...   167   1e-39
ref|XP_003549097.1| PREDICTED: uncharacterized protein LOC100818...   165   4e-39

>ref|XP_002336061.1| predicted protein [Populus trichocarpa] gi|222869846|gb|EEF06977.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  175 bits (444), Expect = 3e-42
 Identities = 90/121 (74%), Positives = 103/121 (85%), Gaps = 2/121 (1%)
 Frame = -1

Query: 513 LEAAIQRRASEGLELELCTEDRIGLLSDITRIFRENSLSIRRAEISTKAGKAIDTFHVTD 334
           LEAAI+RRASEGLELELCTEDR+GLLSDITRIFRENSL I+RAEI TK GKA DTF+VTD
Sbjct: 319 LEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCIKRAEILTKGGKAKDTFYVTD 378

Query: 333 VSGNAVEPKTVDSICRQIGQTILKVKRNSSFTPKSQQETASGFLFGNLFKPR--RSIRTY 160
           V+GN V+PK +DSICRQIGQT L VKRNS  +PK  QET  G++FGNLFK R  + IR+Y
Sbjct: 379 VTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPPQETTMGYIFGNLFKARTFKLIRSY 438

Query: 159 T 157
           +
Sbjct: 439 S 439


>ref|XP_002298641.1| predicted protein [Populus trichocarpa] gi|222845899|gb|EEE83446.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score =  175 bits (444), Expect = 3e-42
 Identities = 90/121 (74%), Positives = 103/121 (85%), Gaps = 2/121 (1%)
 Frame = -1

Query: 513 LEAAIQRRASEGLELELCTEDRIGLLSDITRIFRENSLSIRRAEISTKAGKAIDTFHVTD 334
           LEAAI+RRASEGLELELCTEDR+GLLSDITRIFRENSL I+RAEI TK GKA DTF+VTD
Sbjct: 321 LEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCIKRAEILTKGGKAKDTFYVTD 380

Query: 333 VSGNAVEPKTVDSICRQIGQTILKVKRNSSFTPKSQQETASGFLFGNLFKPR--RSIRTY 160
           V+GN V+PK +DSICRQIGQT L VKRNS  +PK  QET  G++FGNLFK R  + IR+Y
Sbjct: 381 VTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPPQETTMGYIFGNLFKARTFKLIRSY 440

Query: 159 T 157
           +
Sbjct: 441 S 441


>ref|XP_003622132.1| Amino acid binding protein, putative [Medicago truncatula]
           gi|355497147|gb|AES78350.1| Amino acid binding protein,
           putative [Medicago truncatula]
          Length = 475

 Score =  167 bits (422), Expect = 1e-39
 Identities = 86/124 (69%), Positives = 103/124 (83%), Gaps = 5/124 (4%)
 Frame = -1

Query: 513 LEAAIQRRASEGLELELCTEDRIGLLSDITRIFRENSLSIRRAEISTKAGKAIDTFHVTD 334
           LEAAI+RRASEG+ELELCTEDR+GLLSDITRIFRENSL I+RAEIST+ GKA DTF+VTD
Sbjct: 352 LEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTD 411

Query: 333 VSGNAVEPKTVDSICRQIGQTILKVKRNSSFTPKSQQETASGFLFGNLFKPR-----RSI 169
           V+GN V+PK++DSI RQIG T+L+VK NSS +PK  Q T  GFLFG+ FK R     + I
Sbjct: 412 VTGNPVDPKSIDSIRRQIGDTVLQVKHNSSLSPKPPQGTTIGFLFGSFFKARSFQNFKLI 471

Query: 168 RTYT 157
           R+Y+
Sbjct: 472 RSYS 475


>ref|XP_003622131.1| Amino acid binding protein, putative [Medicago truncatula]
           gi|355497146|gb|AES78349.1| Amino acid binding protein,
           putative [Medicago truncatula]
          Length = 442

 Score =  167 bits (422), Expect = 1e-39
 Identities = 86/124 (69%), Positives = 103/124 (83%), Gaps = 5/124 (4%)
 Frame = -1

Query: 513 LEAAIQRRASEGLELELCTEDRIGLLSDITRIFRENSLSIRRAEISTKAGKAIDTFHVTD 334
           LEAAI+RRASEG+ELELCTEDR+GLLSDITRIFRENSL I+RAEIST+ GKA DTF+VTD
Sbjct: 319 LEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTD 378

Query: 333 VSGNAVEPKTVDSICRQIGQTILKVKRNSSFTPKSQQETASGFLFGNLFKPR-----RSI 169
           V+GN V+PK++DSI RQIG T+L+VK NSS +PK  Q T  GFLFG+ FK R     + I
Sbjct: 379 VTGNPVDPKSIDSIRRQIGDTVLQVKHNSSLSPKPPQGTTIGFLFGSFFKARSFQNFKLI 438

Query: 168 RTYT 157
           R+Y+
Sbjct: 439 RSYS 442


>ref|XP_003549097.1| PREDICTED: uncharacterized protein LOC100818506 [Glycine max]
          Length = 445

 Score =  165 bits (417), Expect = 4e-39
 Identities = 85/124 (68%), Positives = 100/124 (80%), Gaps = 5/124 (4%)
 Frame = -1

Query: 513 LEAAIQRRASEGLELELCTEDRIGLLSDITRIFRENSLSIRRAEISTKAGKAIDTFHVTD 334
           LEAAI+RRASEG+ELELCTEDR+GLLSDITRIFRENSL I+RAEIST+ GKA DTF+VTD
Sbjct: 322 LEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLCIKRAEISTEEGKARDTFYVTD 381

Query: 333 VSGNAVEPKTVDSICRQIGQTILKVKRNSSFTPKSQQETASGFLFGNLFKPR-----RSI 169
           V+GN V+PK +DSI RQIG  +LKVK NS+ +PK  Q T  GFL GN FK R     + I
Sbjct: 382 VTGNPVDPKIIDSIRRQIGDKVLKVKHNSNLSPKPSQPTTIGFLLGNFFKARSFQNFKLI 441

Query: 168 RTYT 157
           R+Y+
Sbjct: 442 RSYS 445


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