BLASTX nr result

ID: Coptis24_contig00024736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024736
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523858.1| transcription factor, putative [Ricinus comm...   178   1e-42
ref|XP_003539478.1| PREDICTED: LOW QUALITY PROTEIN: NAC domain-c...   175   8e-42
ref|XP_003541963.1| PREDICTED: NAC domain-containing protein 48-...   172   7e-41
ref|XP_004159117.1| PREDICTED: NAC domain-containing protein 89-...   167   1e-39
ref|XP_004139589.1| PREDICTED: NAC domain-containing protein 89-...   167   1e-39

>ref|XP_002523858.1| transcription factor, putative [Ricinus communis]
           gi|223536946|gb|EEF38584.1| transcription factor,
           putative [Ricinus communis]
          Length = 387

 Score =  178 bits (451), Expect = 1e-42
 Identities = 104/232 (44%), Positives = 132/232 (56%), Gaps = 49/232 (21%)
 Frame = +1

Query: 67  LPSAKSMIQSEHEWFFFSPNDRKYPNGSQARRATEVGFWKATGKERNIKSRKNVIGTKRT 246
           LP+AK++IQSE+EWFFFS   RKYPNG+Q+RRATE+G+WKATGKERN+KS  +VIGTKRT
Sbjct: 62  LPAAKAVIQSENEWFFFSARGRKYPNGTQSRRATELGYWKATGKERNVKSGSDVIGTKRT 121

Query: 247 LVFHLGRAPRGARTDWIMHEYCMKDTKEDKPQDSYVICRLRKKQDF-------------- 384
           LVFH+GRAP+G RT+WIMHEYCM      KPQDS V+CRLR+  +F              
Sbjct: 122 LVFHIGRAPKGERTEWIMHEYCM----HGKPQDSLVVCRLRRNVEFRPNDNSNRNSLNRR 177

Query: 385 ----------------------------------TIKKDDPNSESDDHISPENPAINVAT 462
                                             +I++ D  SESD  +S E P   +A 
Sbjct: 178 QLSASDGGIERTGMSEGDKRAECSRKCSSSYDSHSIEQIDSASESDQKLSNEAP---LAE 234

Query: 463 EVCSDLQHSETGMNGNVKPLEDDCFDDILKDEIVQLDESTSQEPQ-LLPTVA 615
             C      +          E+D + DILKD+IV+LDE+   E Q LLP +A
Sbjct: 235 SSCQQQDSDK----------EEDFYADILKDDIVKLDETPFSEAQELLPFIA 276


>ref|XP_003539478.1| PREDICTED: LOW QUALITY PROTEIN: NAC domain-containing protein
           1-like [Glycine max]
          Length = 371

 Score =  175 bits (443), Expect = 8e-42
 Identities = 97/216 (44%), Positives = 126/216 (58%), Gaps = 44/216 (20%)
 Frame = +1

Query: 67  LPSAKSMIQSEHEWFFFSPNDRKYPNGSQARRATEVGFWKATGKERNIKSRKNVIGTKRT 246
           LP+AKS IQS++EWFFFSP  RKYP GSQ++RATE G+WKATGKERN+KS  NVIGTKRT
Sbjct: 62  LPAAKSFIQSDNEWFFFSPRGRKYPKGSQSKRATECGYWKATGKERNVKSGSNVIGTKRT 121

Query: 247 LVFHLGRAPRGARTDWIMHEYCMKDTKEDKPQDSYVICRLRKKQDFTIKKDDPNSESDDH 426
           LVFHLGRAP+G RT+WIMHEYC+     +K QDS VICRL+K  +F +  D  N  S   
Sbjct: 122 LVFHLGRAPKGERTEWIMHEYCI----NEKSQDSLVICRLKKNTEFRL-GDSSNRASSSQ 176

Query: 427 ISPENP------------------------AINVATEVCS----DLQHSETGMNGNVKPL 522
             P N                           +   + CS     ++  ++    N +P+
Sbjct: 177 RHPVNSHESGCAISEGGIDQRDACEQDKXVGCSSKRDSCSYGSPSMEQIDSVSEPNQRPV 236

Query: 523 ----------------EDDCFDDILKDEIVQLDEST 582
                           E+DC+ +ILKD+I++LDES+
Sbjct: 237 SEATLAVSSGQPKERYEEDCYAEILKDDIIKLDESS 272


>ref|XP_003541963.1| PREDICTED: NAC domain-containing protein 48-like [Glycine max]
          Length = 370

 Score =  172 bits (435), Expect = 7e-41
 Identities = 97/213 (45%), Positives = 125/213 (58%), Gaps = 44/213 (20%)
 Frame = +1

Query: 76  AKSMIQSEHEWFFFSPNDRKYPNGSQARRATEVGFWKATGKERNIKSRKNVIGTKRTLVF 255
           AKS IQS++EWFFFSP  RKYPNGSQ++RATE G+WKATGKERN+KS  N+IGTKRTLVF
Sbjct: 64  AKSFIQSDNEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSNIIGTKRTLVF 123

Query: 256 HLGRAPRGARTDWIMHEYCMKDTKEDKPQDSYVICRLRKKQDFTIKKDDPNSESDDHISP 435
           HLGRAP+G RT+WIMHEYC+     DK Q+S VICRL++  +F +  D  N  S     P
Sbjct: 124 HLGRAPKGERTEWIMHEYCI----NDKSQESLVICRLKRNTEFRL-SDASNRASSSQRHP 178

Query: 436 EN----------------PAINVATEV-CS-----------DLQHSETGMNGNVKPL--- 522
            N                 A     EV CS            ++  ++    N +P+   
Sbjct: 179 VNSHESGCAISGGGIDQRDACEQDKEVGCSSKRDSSSYGSPSMEQIDSVSESNQRPVNEA 238

Query: 523 -------------EDDCFDDILKDEIVQLDEST 582
                        E+DC+ +ILKD+I++LDES+
Sbjct: 239 TFTESSGQPKEGYEEDCYAEILKDDIIKLDESS 271


>ref|XP_004159117.1| PREDICTED: NAC domain-containing protein 89-like [Cucumis sativus]
          Length = 350

 Score =  167 bits (424), Expect = 1e-39
 Identities = 85/174 (48%), Positives = 111/174 (63%), Gaps = 8/174 (4%)
 Frame = +1

Query: 76  AKSMIQSEHEWFFFSPNDRKYPNGSQARRATEVGFWKATGKERNIKSRKNVIGTKRTLVF 255
           AKS+IQS++EWFFFSP  +KYPNG+Q RRAT++G+WKATGKERN+KS  N IGTKRTLVF
Sbjct: 53  AKSIIQSDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKSGSNTIGTKRTLVF 112

Query: 256 HLGRAPRGARTDWIMHEYCMKDTKEDKPQDSYVICRLRKKQDFTIKKDDPNSESDD---- 423
           H GRAP+G RT+WIMHEY  K    DK QD  V+CRLR+  +F        + S      
Sbjct: 113 HTGRAPKGERTEWIMHEYNTK----DKAQDFLVVCRLRRNNEFRQHSCSNRASSSQMNLS 168

Query: 424 ----HISPENPAINVATEVCSDLQHSETGMNGNVKPLEDDCFDDILKDEIVQLD 573
               H S +  +     +  ++  H ++G +       DD + DILKD+I+ LD
Sbjct: 169 LLQAHSSEQVDSTESNQKDAAETTHVDSGDHDQKDCGSDDFYSDILKDDIINLD 222


>ref|XP_004139589.1| PREDICTED: NAC domain-containing protein 89-like [Cucumis sativus]
          Length = 366

 Score =  167 bits (424), Expect = 1e-39
 Identities = 85/174 (48%), Positives = 111/174 (63%), Gaps = 8/174 (4%)
 Frame = +1

Query: 76  AKSMIQSEHEWFFFSPNDRKYPNGSQARRATEVGFWKATGKERNIKSRKNVIGTKRTLVF 255
           AKS+IQS++EWFFFSP  +KYPNG+Q RRAT++G+WKATGKERN+KS  N IGTKRTLVF
Sbjct: 69  AKSIIQSDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKSGSNTIGTKRTLVF 128

Query: 256 HLGRAPRGARTDWIMHEYCMKDTKEDKPQDSYVICRLRKKQDFTIKKDDPNSESDD---- 423
           H GRAP+G RT+WIMHEY  K    DK QD  V+CRLR+  +F        + S      
Sbjct: 129 HTGRAPKGERTEWIMHEYNTK----DKAQDFLVVCRLRRNNEFRQHSCSNRASSSQMNLS 184

Query: 424 ----HISPENPAINVATEVCSDLQHSETGMNGNVKPLEDDCFDDILKDEIVQLD 573
               H S +  +     +  ++  H ++G +       DD + DILKD+I+ LD
Sbjct: 185 LLQAHSSEQVDSTESNQKDAAETTHVDSGDHDQKDCGSDDFYSDILKDDIINLD 238


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