BLASTX nr result

ID: Coptis24_contig00024730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024730
         (1337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37471.3| unnamed protein product [Vitis vinifera]              391   e-106
ref|XP_002263093.1| PREDICTED: uncharacterized protein LOC100264...   391   e-106
ref|XP_004162651.1| PREDICTED: formin-like protein 14-like [Cucu...   370   e-100
ref|XP_004144402.1| PREDICTED: formin-like protein 14-like [Cucu...   369   1e-99
ref|XP_002519876.1| DNA binding protein, putative [Ricinus commu...   367   3e-99

>emb|CBI37471.3| unnamed protein product [Vitis vinifera]
          Length = 1082

 Score =  391 bits (1004), Expect = e-106
 Identities = 197/283 (69%), Positives = 231/283 (81%)
 Frame = +3

Query: 6   EWPPTERAISLDCIILRAIPSFDSQNGCRPIIRIFGRNLIGKGGLSAQMLFSMSKKKKSI 185
           EWPP ERA+SLDC+ LRAIPSFDSQNGCRPIIRIFGRNL  KGGLS QMLFSMSKK+K+I
Sbjct: 195 EWPPPERALSLDCVFLRAIPSFDSQNGCRPIIRIFGRNLHSKGGLSTQMLFSMSKKRKTI 254

Query: 186 RHYRQVDCDVIKIDIQCLVQGDVVLECLHLDVDPERESMMFRVMFNTAFIRSNILMLNRE 365
           RHY Q DCDVIKIDIQC+VQGDVVLEC+HLDVD ERE MMFRVMFNTAFIRSNILMLN E
Sbjct: 255 RHYCQADCDVIKIDIQCMVQGDVVLECVHLDVDSEREVMMFRVMFNTAFIRSNILMLNCE 314

Query: 366 DLDILWGSKERYPKGFRAEVLFGEVESISPPRPPTATLNGEEKGGVPIEAFARVQELFSG 545
           +LDILW SKERYPKGFRAEVLFG+VESISP R PT  LNGEE+GG+PIEAF+RVQELFSG
Sbjct: 315 NLDILWDSKERYPKGFRAEVLFGDVESISPSRAPTEILNGEEQGGLPIEAFSRVQELFSG 374

Query: 546 VEWIDSSGDAAMWLLREISANALQERLEKLIINDPKQLSRLQSKVSVQTSPAESEEENDA 725
           VEW+D+S DA +WLL+++S           ++ND K+LSR  +KVS +TSPA+SEEEN+A
Sbjct: 375 VEWVDNSDDATLWLLKQLS-----------VLNDAKELSRFPNKVSSRTSPADSEEENNA 423

Query: 726 TKVADIVDFVKSDTGEHEKNNTTPPVELSVVSATQDIAFKSSA 854
           + +AD +DF+ S+   +   NTT P +    +   D +F+ SA
Sbjct: 424 SSIADSLDFMDSEK-VNSLTNTTEPAD----NFLDDPSFQDSA 461


>ref|XP_002263093.1| PREDICTED: uncharacterized protein LOC100264917 [Vitis vinifera]
          Length = 1269

 Score =  391 bits (1004), Expect = e-106
 Identities = 197/283 (69%), Positives = 231/283 (81%)
 Frame = +3

Query: 6   EWPPTERAISLDCIILRAIPSFDSQNGCRPIIRIFGRNLIGKGGLSAQMLFSMSKKKKSI 185
           EWPP ERA+SLDC+ LRAIPSFDSQNGCRPIIRIFGRNL  KGGLS QMLFSMSKK+K+I
Sbjct: 195 EWPPPERALSLDCVFLRAIPSFDSQNGCRPIIRIFGRNLHSKGGLSTQMLFSMSKKRKTI 254

Query: 186 RHYRQVDCDVIKIDIQCLVQGDVVLECLHLDVDPERESMMFRVMFNTAFIRSNILMLNRE 365
           RHY Q DCDVIKIDIQC+VQGDVVLEC+HLDVD ERE MMFRVMFNTAFIRSNILMLN E
Sbjct: 255 RHYCQADCDVIKIDIQCMVQGDVVLECVHLDVDSEREVMMFRVMFNTAFIRSNILMLNCE 314

Query: 366 DLDILWGSKERYPKGFRAEVLFGEVESISPPRPPTATLNGEEKGGVPIEAFARVQELFSG 545
           +LDILW SKERYPKGFRAEVLFG+VESISP R PT  LNGEE+GG+PIEAF+RVQELFSG
Sbjct: 315 NLDILWDSKERYPKGFRAEVLFGDVESISPSRAPTEILNGEEQGGLPIEAFSRVQELFSG 374

Query: 546 VEWIDSSGDAAMWLLREISANALQERLEKLIINDPKQLSRLQSKVSVQTSPAESEEENDA 725
           VEW+D+S DA +WLL+++S           ++ND K+LSR  +KVS +TSPA+SEEEN+A
Sbjct: 375 VEWVDNSDDATLWLLKQLS-----------VLNDAKELSRFPNKVSSRTSPADSEEENNA 423

Query: 726 TKVADIVDFVKSDTGEHEKNNTTPPVELSVVSATQDIAFKSSA 854
           + +AD +DF+ S+   +   NTT P +    +   D +F+ SA
Sbjct: 424 SSIADSLDFMDSEK-VNSLTNTTEPAD----NFLDDPSFQDSA 461


>ref|XP_004162651.1| PREDICTED: formin-like protein 14-like [Cucumis sativus]
          Length = 529

 Score =  370 bits (949), Expect = e-100
 Identities = 178/250 (71%), Positives = 208/250 (83%)
 Frame = +3

Query: 6   EWPPTERAISLDCIILRAIPSFDSQNGCRPIIRIFGRNLIGKGGLSAQMLFSMSKKKKSI 185
           EWPP ERA+SLDC+ILR +P FD+QNGCRP+IRIFGRNL  KGGLS QMLFSM KK K++
Sbjct: 195 EWPPPERALSLDCVILRGVPGFDAQNGCRPVIRIFGRNLFSKGGLSTQMLFSMPKKNKAL 254

Query: 186 RHYRQVDCDVIKIDIQCLVQGDVVLECLHLDVDPERESMMFRVMFNTAFIRSNILMLNRE 365
           RHY Q DCDVIKID+QCLVQGDVVLEC HL+ +PERE MMFR+MFNTAFIRSNILML  E
Sbjct: 255 RHYHQADCDVIKIDVQCLVQGDVVLECSHLESEPEREVMMFRIMFNTAFIRSNILMLTSE 314

Query: 366 DLDILWGSKERYPKGFRAEVLFGEVESISPPRPPTATLNGEEKGGVPIEAFARVQELFSG 545
           +LDILW SKERYPKGFRAEVLFGE+E+ISPPR PT+ LNGEEKGG+PIEAF+RVQELFSG
Sbjct: 315 NLDILWESKERYPKGFRAEVLFGEMENISPPRAPTSILNGEEKGGLPIEAFSRVQELFSG 374

Query: 546 VEWIDSSGDAAMWLLREISANALQERLEKLIINDPKQLSRLQSKVSVQTSPAESEEENDA 725
           VEWID++ DAA+WLL+ +SA           ++D K+LSRLQ+K S  +SP +SEEEN+ 
Sbjct: 375 VEWIDNNDDAALWLLKNLSA-----------LSDVKELSRLQNKTSSYSSPVDSEEENNT 423

Query: 726 TKVADIVDFV 755
           +  AD  D V
Sbjct: 424 SSTADSSDEV 433


>ref|XP_004144402.1| PREDICTED: formin-like protein 14-like [Cucumis sativus]
          Length = 1256

 Score =  369 bits (946), Expect = 1e-99
 Identities = 178/250 (71%), Positives = 207/250 (82%)
 Frame = +3

Query: 6   EWPPTERAISLDCIILRAIPSFDSQNGCRPIIRIFGRNLIGKGGLSAQMLFSMSKKKKSI 185
           EWPP ERA+SLDC+ILR +P FD+QNGCRP+IRIFGRNL  KGGLS QMLFSM KK K++
Sbjct: 195 EWPPPERALSLDCVILRGVPGFDAQNGCRPVIRIFGRNLFSKGGLSTQMLFSMPKKNKAL 254

Query: 186 RHYRQVDCDVIKIDIQCLVQGDVVLECLHLDVDPERESMMFRVMFNTAFIRSNILMLNRE 365
           RHY Q DCDVIKID+QCLVQGDVVLEC HL+ +PERE MMFR+MFNTAFIRSNILML  E
Sbjct: 255 RHYHQADCDVIKIDVQCLVQGDVVLECSHLESEPEREVMMFRIMFNTAFIRSNILMLTSE 314

Query: 366 DLDILWGSKERYPKGFRAEVLFGEVESISPPRPPTATLNGEEKGGVPIEAFARVQELFSG 545
           +LDILW SKERYPKGFRAEVLFGE+E+ISPPR PT+ LNGEEKGG+PIEAF+RVQELFSG
Sbjct: 315 NLDILWESKERYPKGFRAEVLFGEMENISPPRAPTSILNGEEKGGLPIEAFSRVQELFSG 374

Query: 546 VEWIDSSGDAAMWLLREISANALQERLEKLIINDPKQLSRLQSKVSVQTSPAESEEENDA 725
           VEWID++ DAA+WLL+ +SA           ++D K+LSRLQ K S  +SP +SEEEN+ 
Sbjct: 375 VEWIDNNDDAALWLLKNLSA-----------LSDVKELSRLQYKTSSYSSPVDSEEENNT 423

Query: 726 TKVADIVDFV 755
           +  AD  D V
Sbjct: 424 SSTADSSDEV 433


>ref|XP_002519876.1| DNA binding protein, putative [Ricinus communis]
           gi|223540922|gb|EEF42480.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 820

 Score =  367 bits (943), Expect = 3e-99
 Identities = 184/268 (68%), Positives = 216/268 (80%), Gaps = 1/268 (0%)
 Frame = +3

Query: 6   EWPPTERAISLDCIILRAIPSFDSQNGCRPIIRIFGRNLIGKGGLSAQMLFSMSKKKKS- 182
           EWPP ERA+SLDCIILRAIPSFDS+ GCRPIIRIFGRNL  K GLS QMLFSMSK+KK+ 
Sbjct: 195 EWPPPERALSLDCIILRAIPSFDSEKGCRPIIRIFGRNLHTKSGLSTQMLFSMSKRKKTT 254

Query: 183 IRHYRQVDCDVIKIDIQCLVQGDVVLECLHLDVDPERESMMFRVMFNTAFIRSNILMLNR 362
           +RHY Q DCDVIKIDIQCLVQGDVVLEC+HLD+DPERE MMFRVMFNTAFIRSNILMLN 
Sbjct: 255 LRHYCQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNS 314

Query: 363 EDLDILWGSKERYPKGFRAEVLFGEVESISPPRPPTATLNGEEKGGVPIEAFARVQELFS 542
           E+LDILW SKERYPKGFRAEVLFG+ ESISPP+ PT  LNGEEKGG+PIEAF+RVQELFS
Sbjct: 315 ENLDILWDSKERYPKGFRAEVLFGDAESISPPKAPTTILNGEEKGGLPIEAFSRVQELFS 374

Query: 543 GVEWIDSSGDAAMWLLREISANALQERLEKLIINDPKQLSRLQSKVSVQTSPAESEEEND 722
           GVEW+D++ DAA+WLL+++S           ++ D ++ SRLQ+K S  TSP +SEEE +
Sbjct: 375 GVEWVDNNEDAALWLLKQLS-----------VLTDAREFSRLQNKSSSYTSPIDSEEEYN 423

Query: 723 ATKVADIVDFVKSDTGEHEKNNTTPPVE 806
           A+  AD  D       ++  ++   P+E
Sbjct: 424 ASSTADSSDEAFDLNPKNSADSVLLPIE 451


Top