BLASTX nr result

ID: Coptis24_contig00024699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024699
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40584.3| unnamed protein product [Vitis vinifera]              187   1e-45
ref|XP_002264541.1| PREDICTED: bifunctional fucokinase/fucose py...   187   1e-45
emb|CAN66976.1| hypothetical protein VITISV_022079 [Vitis vinifera]   187   1e-45
ref|XP_002320880.1| predicted protein [Populus trichocarpa] gi|2...   181   7e-44
ref|XP_004134296.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional...   179   3e-43

>emb|CBI40584.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  187 bits (474), Expect = 1e-45
 Identities = 86/92 (93%), Positives = 91/92 (98%)
 Frame = +2

Query: 2   KRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQAFKNKGGVFIMTGDVL 181
           KRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAIS CARQAFKN+GG+FIMTGDVL
Sbjct: 151 KRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISCCARQAFKNEGGIFIMTGDVL 210

Query: 182 PCFDASTMVLPEDSSCIITVPITLDVASNHGV 277
           PCFDASTMVLPED+SCIITVP+TLD+ASNHGV
Sbjct: 211 PCFDASTMVLPEDTSCIITVPLTLDIASNHGV 242


>ref|XP_002264541.1| PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like
           [Vitis vinifera]
          Length = 1079

 Score =  187 bits (474), Expect = 1e-45
 Identities = 86/92 (93%), Positives = 91/92 (98%)
 Frame = +2

Query: 2   KRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQAFKNKGGVFIMTGDVL 181
           KRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAIS CARQAFKN+GG+FIMTGDVL
Sbjct: 147 KRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISCCARQAFKNEGGIFIMTGDVL 206

Query: 182 PCFDASTMVLPEDSSCIITVPITLDVASNHGV 277
           PCFDASTMVLPED+SCIITVP+TLD+ASNHGV
Sbjct: 207 PCFDASTMVLPEDTSCIITVPLTLDIASNHGV 238


>emb|CAN66976.1| hypothetical protein VITISV_022079 [Vitis vinifera]
          Length = 949

 Score =  187 bits (474), Expect = 1e-45
 Identities = 86/92 (93%), Positives = 91/92 (98%)
 Frame = +2

Query: 2   KRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQAFKNKGGVFIMTGDVL 181
           KRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAIS CARQAFKN+GG+FIMTGDVL
Sbjct: 43  KRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISCCARQAFKNEGGIFIMTGDVL 102

Query: 182 PCFDASTMVLPEDSSCIITVPITLDVASNHGV 277
           PCFDASTMVLPED+SCIITVP+TLD+ASNHGV
Sbjct: 103 PCFDASTMVLPEDTSCIITVPLTLDIASNHGV 134


>ref|XP_002320880.1| predicted protein [Populus trichocarpa] gi|222861653|gb|EEE99195.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/92 (89%), Positives = 90/92 (97%)
 Frame = +2

Query: 2   KRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQAFKNKGGVFIMTGDVL 181
           KRVPWANPMGK+FLPLP+LAADDPDGPVPLLFDHILAI+SCARQAFKN+GG+  MTGDVL
Sbjct: 16  KRVPWANPMGKIFLPLPFLAADDPDGPVPLLFDHILAIASCARQAFKNEGGILTMTGDVL 75

Query: 182 PCFDASTMVLPEDSSCIITVPITLDVASNHGV 277
           PCFDAST+V+PED+SCIITVPITLDVASNHGV
Sbjct: 76  PCFDASTLVIPEDASCIITVPITLDVASNHGV 107


>ref|XP_004134296.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional fucokinase/fucose
           pyrophosphorylase-like [Cucumis sativus]
           gi|449478213|ref|XP_004155252.1| PREDICTED: LOW QUALITY
           PROTEIN: bifunctional fucokinase/fucose
           pyrophosphorylase-like [Cucumis sativus]
          Length = 1065

 Score =  179 bits (453), Expect = 3e-43
 Identities = 81/92 (88%), Positives = 88/92 (95%)
 Frame = +2

Query: 2   KRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQAFKNKGGVFIMTGDVL 181
           KRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAI+SCARQAFKN+GG+  MTGDVL
Sbjct: 150 KRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAIASCARQAFKNEGGILTMTGDVL 209

Query: 182 PCFDASTMVLPEDSSCIITVPITLDVASNHGV 277
           PCFDAS ++LPE+ SCIITVPITLD+ASNHGV
Sbjct: 210 PCFDASALILPEEDSCIITVPITLDIASNHGV 241


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