BLASTX nr result

ID: Coptis24_contig00024683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024683
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADY68770.1| DREB1/CBF transcription factor [Adonis amurensis]       71   8e-11
gb|AAR28671.1| CBF-like transcription factor [Vitis riparia]           57   2e-06
gb|ADY17818.1| CBF1 transcription factor [Vitis amurensis] gi|35...    57   2e-06
gb|ABU55659.1| CBF1-like protein [Ampelopsis glandulosa var. bre...    57   2e-06
gb|ABU55658.1| CBF1-like protein [Vitis aestivalis]                    57   2e-06

>gb|ADY68770.1| DREB1/CBF transcription factor [Adonis amurensis]
          Length = 206

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 48/118 (40%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
 Frame = -2

Query: 346 WLGTHSTPEMXXXXXXXXXR---GKSAPLNFPDSAWLLPRPKSSSAEDVKSXXXXXXXXX 176
           WLGT  TP M             GKSAPLNF DSAWLLPRPKSSSA+D+K          
Sbjct: 74  WLGTFPTPGMAARAYDVAALALRGKSAPLNFVDSAWLLPRPKSSSAQDIKLAASEAAQAF 133

Query: 175 XXXXXXXXXXXXXXXXXXXXXTYVHLRRVKSLENPPEYTRMFWDDEEALFNLPSLLDS 2
                                         +L  P E + MFW DEEA+FN+PSLLD+
Sbjct: 134 APTATSSSSSSSP----------------MNLRVPVEPSSMFW-DEEAMFNMPSLLDN 174


>gb|AAR28671.1| CBF-like transcription factor [Vitis riparia]
          Length = 251

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/50 (58%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
 Frame = -2

Query: 346 WLGTHSTPEMXXXXXXXXXR---GKSAPLNFPDSAWLLPRPKSSSAEDVK 206
           WLGT  TPEM             G+ A LNFPDSAW LPRPKSSSAED++
Sbjct: 77  WLGTFPTPEMAARAHDVAALALRGRFASLNFPDSAWRLPRPKSSSAEDIQ 126


>gb|ADY17818.1| CBF1 transcription factor [Vitis amurensis]
           gi|354549083|gb|AER27641.1| AP2/ERF protein [Vitis
           amurensis]
          Length = 251

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/50 (58%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
 Frame = -2

Query: 346 WLGTHSTPEMXXXXXXXXXR---GKSAPLNFPDSAWLLPRPKSSSAEDVK 206
           WLGT  TPEM             G+ A LNFPDSAW LPRPKSSSAED++
Sbjct: 77  WLGTFPTPEMAARAHDVAALALRGRFASLNFPDSAWRLPRPKSSSAEDIQ 126


>gb|ABU55659.1| CBF1-like protein [Ampelopsis glandulosa var. brevipedunculata]
          Length = 247

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/50 (58%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
 Frame = -2

Query: 346 WLGTHSTPEMXXXXXXXXXR---GKSAPLNFPDSAWLLPRPKSSSAEDVK 206
           WLGT  TPEM             G+ A LNFPDSAW LPRPKSSSAED++
Sbjct: 73  WLGTFPTPEMAARAHDVAALALRGRFASLNFPDSAWRLPRPKSSSAEDIQ 122


>gb|ABU55658.1| CBF1-like protein [Vitis aestivalis]
          Length = 270

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/50 (58%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
 Frame = -2

Query: 346 WLGTHSTPEMXXXXXXXXXR---GKSAPLNFPDSAWLLPRPKSSSAEDVK 206
           WLGT  TPEM             G+ A LNFPDSAW LPRPKSSSAED++
Sbjct: 73  WLGTFPTPEMAARAHDVAALALRGRFASLNFPDSAWRLPRPKSSSAEDIQ 122


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