BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024678
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...    74   9e-12
ref|XP_002510728.1| RNA binding protein, putative [Ricinus commu...    74   2e-11
ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...    73   3e-11
gb|AAF16655.1|AC012394_4 putative RNA-binding protein; 16955-184...    72   4e-11
ref|NP_565132.2| RNA recognition motif-containing protein [Arabi...    72   4e-11

>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/44 (77%), Positives = 36/44 (81%)
 Frame = +1

Query: 1   VTFRDPEAAKRACLDQSPVIHGR*ANCNLASFGRPRPPPPYDNL 132
           VTFRDPEAA+RAC D SPVI GR ANCNLAS GRPRPP PY  +
Sbjct: 78  VTFRDPEAARRACADPSPVIDGRRANCNLASLGRPRPPLPYGRI 121


>ref|XP_002510728.1| RNA binding protein, putative [Ricinus communis]
           gi|223551429|gb|EEF52915.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 325

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/44 (75%), Positives = 36/44 (81%)
 Frame = +1

Query: 1   VTFRDPEAAKRACLDQSPVIHGR*ANCNLASFGRPRPPPPYDNL 132
           VTFR+PEAAKRAC D +P+I GR ANCNLAS GRPRPP PY  L
Sbjct: 55  VTFREPEAAKRACADPTPIIDGRRANCNLASLGRPRPPMPYGRL 98


>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
           max]
          Length = 293

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/41 (80%), Positives = 35/41 (85%)
 Frame = +1

Query: 1   VTFRDPEAAKRACLDQSPVIHGR*ANCNLASFGRPRPPPPY 123
           VTFRDPEAA+RAC D +PVI GR ANCNLAS GRPRPP PY
Sbjct: 78  VTFRDPEAARRACADPTPVIDGRRANCNLASLGRPRPPLPY 118


>gb|AAF16655.1|AC012394_4 putative RNA-binding protein; 16955-18423 [Arabidopsis thaliana]
           gi|12323977|gb|AAG51948.1|AC015450_9 putative
           RNA-binding protein; 24808-23340 [Arabidopsis thaliana]
          Length = 279

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +1

Query: 1   VTFRDPEAAKRACLDQSPVIHGR*ANCNLASFGRPRPPPPY 123
           VTFRDPEAA+RAC D +P+I GR ANCNLAS GRPRPP PY
Sbjct: 70  VTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPPLPY 110


>ref|NP_565132.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|332197724|gb|AEE35845.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 285

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +1

Query: 1   VTFRDPEAAKRACLDQSPVIHGR*ANCNLASFGRPRPPPPY 123
           VTFRDPEAA+RAC D +P+I GR ANCNLAS GRPRPP PY
Sbjct: 70  VTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPPLPY 110