BLASTX nr result

ID: Coptis24_contig00024668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024668
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27295.3| unnamed protein product [Vitis vinifera]               55   6e-06
ref|XP_002274025.1| PREDICTED: ninja-family protein AFP1 [Vitis ...    55   6e-06

>emb|CBI27295.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +1

Query: 1   TPAEFVKHAGGGDVEHPLRHIVVSPSS 81
           +PAEFVKHAGGGDV HPLRHIVV+PSS
Sbjct: 323 SPAEFVKHAGGGDVAHPLRHIVVNPSS 349


>ref|XP_002274025.1| PREDICTED: ninja-family protein AFP1 [Vitis vinifera]
          Length = 360

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +1

Query: 1   TPAEFVKHAGGGDVEHPLRHIVVSPSS 81
           +PAEFVKHAGGGDV HPLRHIVV+PSS
Sbjct: 330 SPAEFVKHAGGGDVAHPLRHIVVNPSS 356


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