BLASTX nr result
ID: Coptis24_contig00024656
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024656 (368 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315642.1| type-b response regulator [Populus trichocar... 169 2e-40 ref|XP_002274673.1| PREDICTED: two-component response regulator ... 169 3e-40 emb|CBM42563.1| putative B-type response regulator 21 [Populus x... 168 4e-40 emb|CBM42565.1| putative B-type response regulator 14 [Populus x... 167 8e-40 ref|XP_002515016.1| two-component sensor histidine kinase bacter... 165 3e-39 >ref|XP_002315642.1| type-b response regulator [Populus trichocarpa] gi|222864682|gb|EEF01813.1| type-b response regulator [Populus trichocarpa] Length = 250 Score = 169 bits (429), Expect = 2e-40 Identities = 82/122 (67%), Positives = 97/122 (79%) Frame = -2 Query: 367 PVIMMSVDGEINRVMKGVLHGACDYLLKPIRMKELQNIWQHVVRKKIHEVKDLETHEGSE 188 PVIMMSVDGE +RVMKGV HGACDYLLKPIRMKEL+NIWQHV RKKIHEV+D+E EG E Sbjct: 84 PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIEILEGIE 143 Query: 187 SIQKMRNGLDAFDDSHLLAGGDLASARRRKDLEYHGLDDQDFSDSSAAKKARVVWSTDLH 8 S Q RNG D ++D H L G DL ++RKD+E D++D D+++AKKARVVWS +LH Sbjct: 144 SFQMTRNGSDLYEDGHFLCGEDLTLIKKRKDIESKH-DEKDIGDNTSAKKARVVWSVELH 202 Query: 7 QK 2 QK Sbjct: 203 QK 204 >ref|XP_002274673.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera] Length = 570 Score = 169 bits (427), Expect = 3e-40 Identities = 81/122 (66%), Positives = 96/122 (78%) Frame = -2 Query: 367 PVIMMSVDGEINRVMKGVLHGACDYLLKPIRMKELQNIWQHVVRKKIHEVKDLETHEGSE 188 PVIMMSVDGE +RVMKGV HGACDYLLKP+RMKEL+NIWQHV RKKIHE KD+E++E Sbjct: 91 PVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELKNIWQHVFRKKIHEGKDVESYECMR 150 Query: 187 SIQKMRNGLDAFDDSHLLAGGDLASARRRKDLEYHGLDDQDFSDSSAAKKARVVWSTDLH 8 IQ + + D FDD H L GG+L + R+RKD+E DDQ+ D S++KKARVVWS DLH Sbjct: 151 EIQMIMSRSDEFDDGHQLNGGELGATRKRKDMENRRHDDQELVDPSSSKKARVVWSIDLH 210 Query: 7 QK 2 QK Sbjct: 211 QK 212 >emb|CBM42563.1| putative B-type response regulator 21 [Populus x canadensis] Length = 563 Score = 168 bits (426), Expect = 4e-40 Identities = 82/122 (67%), Positives = 97/122 (79%) Frame = -2 Query: 367 PVIMMSVDGEINRVMKGVLHGACDYLLKPIRMKELQNIWQHVVRKKIHEVKDLETHEGSE 188 PVIMMSVDGE +RVMKGV HGACDYLLKPIRMKEL+NIWQHV RKKIHEV+D+E EG E Sbjct: 91 PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIEILEGIE 150 Query: 187 SIQKMRNGLDAFDDSHLLAGGDLASARRRKDLEYHGLDDQDFSDSSAAKKARVVWSTDLH 8 S Q RNG D ++D H L G DL ++RKD+E D++D D+++AKKARVVWS +LH Sbjct: 151 SFQMTRNGSDQYEDGHFLCGEDLTLIKKRKDIESKH-DEKDNGDNTSAKKARVVWSVELH 209 Query: 7 QK 2 QK Sbjct: 210 QK 211 >emb|CBM42565.1| putative B-type response regulator 14 [Populus x canadensis] Length = 594 Score = 167 bits (423), Expect = 8e-40 Identities = 83/122 (68%), Positives = 95/122 (77%) Frame = -2 Query: 367 PVIMMSVDGEINRVMKGVLHGACDYLLKPIRMKELQNIWQHVVRKKIHEVKDLETHEGSE 188 PVIMMSVDGE +RVMKGV HGACDYLLKPIRMKEL+NIWQHV RKKIHEV+D+ET E E Sbjct: 92 PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIETLERVE 151 Query: 187 SIQKMRNGLDAFDDSHLLAGGDLASARRRKDLEYHGLDDQDFSDSSAAKKARVVWSTDLH 8 S Q RNG D ++D H+L G DL S ++RK E D++D DS + KKARVVWS DLH Sbjct: 152 SFQMTRNGSDQYEDGHVLCGEDLTSIKKRKHFESKH-DEKDTGDSISTKKARVVWSVDLH 210 Query: 7 QK 2 QK Sbjct: 211 QK 212 >ref|XP_002515016.1| two-component sensor histidine kinase bacteria, putative [Ricinus communis] gi|223546067|gb|EEF47570.1| two-component sensor histidine kinase bacteria, putative [Ricinus communis] Length = 584 Score = 165 bits (418), Expect = 3e-39 Identities = 85/122 (69%), Positives = 96/122 (78%) Frame = -2 Query: 367 PVIMMSVDGEINRVMKGVLHGACDYLLKPIRMKELQNIWQHVVRKKIHEVKDLETHEGSE 188 PVIMMSVDGE +RVMKGV HGACDYLLKPIRMKEL+NIWQHV RKKIHEV+D+E EG E Sbjct: 91 PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIEILEGME 150 Query: 187 SIQKMRNGLDAFDDSHLLAGGDLASARRRKDLEYHGLDDQDFSDSSAAKKARVVWSTDLH 8 SIQ R G D DD +L G DL S ++RKD+E + DD+D +SS KKARVVWS DLH Sbjct: 151 SIQMARIGSDHSDDGYLFCGEDLTSVKKRKDIE-NKHDDKD-GESSTTKKARVVWSVDLH 208 Query: 7 QK 2 QK Sbjct: 209 QK 210