BLASTX nr result
ID: Coptis24_contig00024651
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024651 (452 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochon... 69 4e-10 ref|XP_003541221.1| PREDICTED: proline dehydrogenase 2, mitochon... 63 2e-08 gb|ABK91948.1| proline dehydrogenase [Actinidia deliciosa] 63 2e-08 ref|NP_001237288.1| proline dehydrogenase [Glycine max] gi|40457... 63 2e-08 dbj|BAB83948.1| CIG1 [Nicotiana tabacum] 56 3e-06 >ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochondrial [Vitis vinifera] gi|298204407|emb|CBI16887.3| unnamed protein product [Vitis vinifera] Length = 500 Score = 68.9 bits (167), Expect = 4e-10 Identities = 32/59 (54%), Positives = 47/59 (79%) Frame = -2 Query: 178 SNTARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFGIWVMRSRLIDTPLCKEI 2 S+T+ + L D + LFSS+ST +LLRS VNLHLA++E VD G+WVM+SR+++T + +EI Sbjct: 56 SSTSTIDLHDVKGLFSSMSTAKLLRSSVNLHLATLEPMVDVGMWVMKSRVLETAVLREI 114 >ref|XP_003541221.1| PREDICTED: proline dehydrogenase 2, mitochondrial-like [Glycine max] Length = 495 Score = 63.2 bits (152), Expect = 2e-08 Identities = 29/59 (49%), Positives = 43/59 (72%) Frame = -2 Query: 178 SNTARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFGIWVMRSRLIDTPLCKEI 2 + TA L+LDD ERLF+SVSTK+LLRS LH ++ VD G+W+M+SR+ + + K++ Sbjct: 57 AGTAALNLDDAERLFASVSTKRLLRSSAVLHATAVGPMVDLGMWMMKSRVFQSGVLKDL 115 >gb|ABK91948.1| proline dehydrogenase [Actinidia deliciosa] Length = 508 Score = 63.2 bits (152), Expect = 2e-08 Identities = 30/57 (52%), Positives = 41/57 (71%) Frame = -2 Query: 172 TARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFGIWVMRSRLIDTPLCKEI 2 T L+L+ + LFSSV T +LLRS NLH+A+IE VD GIWVM S+L+ P+ +E+ Sbjct: 71 TTILNLNAVKELFSSVPTLKLLRSAANLHVAAIEPMVDLGIWVMNSKLMTAPVAREV 127 >ref|NP_001237288.1| proline dehydrogenase [Glycine max] gi|40457261|gb|AAR86686.1| proline dehydrogenase [Glycine max] Length = 497 Score = 63.2 bits (152), Expect = 2e-08 Identities = 29/59 (49%), Positives = 43/59 (72%) Frame = -2 Query: 178 SNTARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFGIWVMRSRLIDTPLCKEI 2 + TA L+LDD ERLF+SVSTK+LLRS LH ++ VD G+W+M+SR+ + + K++ Sbjct: 57 AGTAALNLDDAERLFASVSTKRLLRSSAVLHATAVGPMVDLGMWMMKSRVFQSGVLKDL 115 >dbj|BAB83948.1| CIG1 [Nicotiana tabacum] Length = 493 Score = 56.2 bits (134), Expect = 3e-06 Identities = 28/63 (44%), Positives = 41/63 (65%) Frame = -2 Query: 190 DKQVSNTARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFGIWVMRSRLIDTPLC 11 DK+V N +D + LF+ VST +L+RS + L +A+ E VD GIWVM S+L+ P+ Sbjct: 56 DKKVIN-----FEDVKELFTGVSTLKLIRSTLTLQMAATEPMVDVGIWVMNSKLMHMPIV 110 Query: 10 KEI 2 KE+ Sbjct: 111 KEV 113