BLASTX nr result

ID: Coptis24_contig00024651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024651
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochon...    69   4e-10
ref|XP_003541221.1| PREDICTED: proline dehydrogenase 2, mitochon...    63   2e-08
gb|ABK91948.1| proline dehydrogenase [Actinidia deliciosa]             63   2e-08
ref|NP_001237288.1| proline dehydrogenase [Glycine max] gi|40457...    63   2e-08
dbj|BAB83948.1| CIG1 [Nicotiana tabacum]                               56   3e-06

>ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochondrial [Vitis vinifera]
           gi|298204407|emb|CBI16887.3| unnamed protein product
           [Vitis vinifera]
          Length = 500

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/59 (54%), Positives = 47/59 (79%)
 Frame = -2

Query: 178 SNTARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFGIWVMRSRLIDTPLCKEI 2
           S+T+ + L D + LFSS+ST +LLRS VNLHLA++E  VD G+WVM+SR+++T + +EI
Sbjct: 56  SSTSTIDLHDVKGLFSSMSTAKLLRSSVNLHLATLEPMVDVGMWVMKSRVLETAVLREI 114


>ref|XP_003541221.1| PREDICTED: proline dehydrogenase 2, mitochondrial-like [Glycine
           max]
          Length = 495

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/59 (49%), Positives = 43/59 (72%)
 Frame = -2

Query: 178 SNTARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFGIWVMRSRLIDTPLCKEI 2
           + TA L+LDD ERLF+SVSTK+LLRS   LH  ++   VD G+W+M+SR+  + + K++
Sbjct: 57  AGTAALNLDDAERLFASVSTKRLLRSSAVLHATAVGPMVDLGMWMMKSRVFQSGVLKDL 115


>gb|ABK91948.1| proline dehydrogenase [Actinidia deliciosa]
          Length = 508

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = -2

Query: 172 TARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFGIWVMRSRLIDTPLCKEI 2
           T  L+L+  + LFSSV T +LLRS  NLH+A+IE  VD GIWVM S+L+  P+ +E+
Sbjct: 71  TTILNLNAVKELFSSVPTLKLLRSAANLHVAAIEPMVDLGIWVMNSKLMTAPVAREV 127


>ref|NP_001237288.1| proline dehydrogenase [Glycine max] gi|40457261|gb|AAR86686.1|
           proline dehydrogenase [Glycine max]
          Length = 497

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/59 (49%), Positives = 43/59 (72%)
 Frame = -2

Query: 178 SNTARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFGIWVMRSRLIDTPLCKEI 2
           + TA L+LDD ERLF+SVSTK+LLRS   LH  ++   VD G+W+M+SR+  + + K++
Sbjct: 57  AGTAALNLDDAERLFASVSTKRLLRSSAVLHATAVGPMVDLGMWMMKSRVFQSGVLKDL 115


>dbj|BAB83948.1| CIG1 [Nicotiana tabacum]
          Length = 493

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/63 (44%), Positives = 41/63 (65%)
 Frame = -2

Query: 190 DKQVSNTARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFGIWVMRSRLIDTPLC 11
           DK+V N      +D + LF+ VST +L+RS + L +A+ E  VD GIWVM S+L+  P+ 
Sbjct: 56  DKKVIN-----FEDVKELFTGVSTLKLIRSTLTLQMAATEPMVDVGIWVMNSKLMHMPIV 110

Query: 10  KEI 2
           KE+
Sbjct: 111 KEV 113


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