BLASTX nr result

ID: Coptis24_contig00024648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024648
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329253.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
ref|XP_004141604.1| PREDICTED: 2,3-bisphosphoglycerate-independe...    76   3e-12
gb|AFK41329.1| unknown [Lotus japonicus]                               75   4e-12
ref|XP_003552632.1| PREDICTED: 2,3-bisphosphoglycerate-independe...    74   1e-11
ref|XP_002305972.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11

>ref|XP_002329253.1| predicted protein [Populus trichocarpa] gi|222870707|gb|EEF07838.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 38/65 (58%), Positives = 43/65 (66%), Gaps = 12/65 (18%)
 Frame = +2

Query: 92  TGKHPKERVAFVLIDGLGDVLLPRFGYRTPLQVAKTPNL------------DPIEAGLAC 235
           T +HPK RVAF+LIDGLGDV LPR GY+TPLQ A  PNL            DP+E GL C
Sbjct: 3   TAQHPKRRVAFILIDGLGDVSLPRLGYKTPLQAANVPNLDAIASAGVNGLMDPVEVGLGC 62

Query: 236 RSDTS 250
            SDT+
Sbjct: 63  GSDTA 67


>ref|XP_004141604.1| PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate
           mutase-like [Cucumis sativus]
          Length = 434

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/63 (58%), Positives = 45/63 (71%), Gaps = 12/63 (19%)
 Frame = +2

Query: 98  KHPKERVAFVLIDGLGDVLLPRFGYRTPLQVAKTPNL------------DPIEAGLACRS 241
           + PK+RVAFVLIDGLGDV +P+FG++TPLQVAK PNL            DP+E GL C S
Sbjct: 5   QQPKKRVAFVLIDGLGDVSIPKFGFKTPLQVAKVPNLDAIASAGANGLMDPVEVGLGCGS 64

Query: 242 DTS 250
           DT+
Sbjct: 65  DTA 67


>gb|AFK41329.1| unknown [Lotus japonicus]
          Length = 390

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/61 (62%), Positives = 43/61 (70%), Gaps = 12/61 (19%)
 Frame = +2

Query: 104 PKERVAFVLIDGLGDVLLPRFGYRTPLQVAKTPNL------------DPIEAGLACRSDT 247
           PK+RVAFVLIDG+GDV LPR GY+TPLQ AK PNL            DP+E GLAC SDT
Sbjct: 7   PKKRVAFVLIDGMGDVSLPRLGYKTPLQAAKLPNLDAIASAGVNGLMDPVEVGLACGSDT 66

Query: 248 S 250
           +
Sbjct: 67  A 67


>ref|XP_003552632.1| PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate
           mutase 1-like [Glycine max]
          Length = 496

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/61 (62%), Positives = 42/61 (68%), Gaps = 12/61 (19%)
 Frame = +2

Query: 104 PKERVAFVLIDGLGDVLLPRFGYRTPLQVAKTPNL------------DPIEAGLACRSDT 247
           PK+RVAFVLIDGL DV LPR GY+TPLQ AK PNL            DP+E GLAC SDT
Sbjct: 7   PKKRVAFVLIDGLADVSLPRLGYKTPLQAAKLPNLDAIASAGVNGLMDPVEVGLACGSDT 66

Query: 248 S 250
           +
Sbjct: 67  A 67


>ref|XP_002305972.1| predicted protein [Populus trichocarpa] gi|222848936|gb|EEE86483.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/65 (56%), Positives = 42/65 (64%), Gaps = 12/65 (18%)
 Frame = +2

Query: 92  TGKHPKERVAFVLIDGLGDVLLPRFGYRTPLQVAKTPNL------------DPIEAGLAC 235
           T + PK RVAF+LIDGLGDV LPR GY+TPLQ A  PNL            DP+E GL C
Sbjct: 3   TPQQPKRRVAFILIDGLGDVSLPRLGYKTPLQAANVPNLDAIASGGVNGLMDPVEVGLGC 62

Query: 236 RSDTS 250
            SDT+
Sbjct: 63  GSDTA 67


Top